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HYB, HYBONDS
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HYB, HYBONDS
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NAME
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HYB, HYBONDS - generate hydrogen bonds.
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SYNOPSIS
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HYB
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HYB style
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HYB OFF
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HYBONDS
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HYBONDS style
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HYBONDS OFF
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DESCRIPTION
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Generate hydrogen bonds for the entire structure. Show hydrogen bonds for
visible atoms. At present, some very simple geometric restrains are used to
generate hydrogen bonds. Check the configuration file (.garlicrc) and the
source file gen_hybonds.c to learn more about these restrains.
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Keyword OFF may be used to hide hydrogen bonds.
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For hydrogen bonds, there is no proportional ("nice") style. The only
available styles are 0, 1, 2, 3, 4 and 5.
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Default style used to draw hydrogen bonds is 1 (a single line of fixed width).
You can change it by specifying the style. Examples:
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<table border=2 cellspacing=2 cellpading=0>
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hyb
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Generate hydrogen bonds and
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show them using default style (1).
</td>
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<td align="left">
hyb 4
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<td align="left">
Generate hydrogen bonds and
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show them using style 4 (four lines).
</td>
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<td align="left">
hyb off
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<td align="left">
Hide hydrogen bonds
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