# Loading and displaying 18 porins. # All structures will be displayed as cyan-blue backbones. # The following patterns will be outlined: # (1) very_polar - aromatic (red) # (2) aromatic - very_polar (yellow) # will be colored red. # Turn refreshing off, for better performance (don't forget # to switch the refreshing on at the end of this script!): refresh off # (1) 2POR: load 2por.pdb backbone 2 color cyan-blue pattern = arg lys asp glu asn gln / phe tyr trp select pattern color red pattern = phe tyr trp / arg lys asp glu asn gln select pattern color yellow position -120 -90 600 # (2) 1OPF: load 1opf.pdb backbone 2 color cyan-blue pattern = arg lys asp glu asn gln / phe tyr trp select pattern color red pattern = phe tyr trp / arg lys asp glu asn gln select pattern color yellow position -60 -90 600 # (3) 1PRN: load 1prn.pdb backbone 2 color cyan-blue pattern = arg lys asp glu asn gln / phe tyr trp select pattern color red pattern = phe tyr trp / arg lys asp glu asn gln select pattern color yellow position 0 -90 600 # (4) 1OSM: load 1osm.pdb backbone 2 color cyan-blue pattern = arg lys asp glu asn gln / phe tyr trp select pattern color red pattern = phe tyr trp / arg lys asp glu asn gln select pattern color yellow position 60 -90 600 # (5) 1E54: load 1e54.pdb backbone 2 color cyan-blue pattern = arg lys asp glu asn gln / phe tyr trp select pattern color red pattern = phe tyr trp / arg lys asp glu asn gln select pattern color yellow position 120 -90 600 # (6) 1MAL: load 1mal.pdb backbone 2 color cyan-blue pattern = arg lys asp glu asn gln / phe tyr trp select pattern color red pattern = phe tyr trp / arg lys asp glu asn gln select pattern color yellow position -120 -30 600 # (7) 1A0S: load 1a0s.pdb backbone 2 color cyan-blue pattern = arg lys asp glu asn gln / phe tyr trp select pattern color red pattern = phe tyr trp / arg lys asp glu asn gln select pattern color yellow position -60 -30 600 # (8) 1BXW: load 1bxw.pdb backbone 2 color cyan-blue pattern = arg lys asp glu asn gln / phe tyr trp select pattern color red pattern = phe tyr trp / arg lys asp glu asn gln select pattern color yellow position 0 -30 600 # (9) 1QJ8: load 1qj8.pdb backbone 2 color cyan-blue pattern = arg lys asp glu asn gln / phe tyr trp select pattern color red pattern = phe tyr trp / arg lys asp glu asn gln select pattern color yellow position 60 -30 600 # (10) 2FCP: load 2fcp.pdb backbone 2 color cyan-blue pattern = arg lys asp glu asn gln / phe tyr trp select pattern color red pattern = phe tyr trp / arg lys asp glu asn gln select pattern color yellow position 120 -30 600 # (11) 1FEP: load 1fep.pdb backbone 2 color cyan-blue pattern = arg lys asp glu asn gln / phe tyr trp select pattern color red pattern = phe tyr trp / arg lys asp glu asn gln select pattern color yellow position -120 30 600 # (12) 1KMO: load 1kmo.pdb backbone 2 color cyan-blue pattern = arg lys asp glu asn gln / phe tyr trp select pattern color red pattern = phe tyr trp / arg lys asp glu asn gln select pattern color yellow position -60 30 600 # (13) 1QD5: load 1qd5.pdb backbone 2 color cyan-blue pattern = arg lys asp glu asn gln / phe tyr trp select pattern color red pattern = phe tyr trp / arg lys asp glu asn gln select pattern color yellow position 0 30 600 # (14) 1I78: load 1i78.pdb backbone 2 color cyan-blue pattern = arg lys asp glu asn gln / phe tyr trp select pattern color red pattern = phe tyr trp / arg lys asp glu asn gln select pattern color yellow position 60 30 600 # (15) 1K24: load 1k24.pdb backbone 2 color cyan-blue pattern = arg lys asp glu asn gln / phe tyr trp select pattern color red pattern = phe tyr trp / arg lys asp glu asn gln select pattern color yellow position 120 30 600 # (16) 1NQE: load 1nqe.pdb backbone 2 color cyan-blue pattern = arg lys asp glu asn gln / phe tyr trp select pattern color red pattern = phe tyr trp / arg lys asp glu asn gln select pattern color yellow position -120 90 600 # (17) 1TLZ: load 1tlz.pdb backbone 2 color cyan-blue pattern = arg lys asp glu asn gln / phe tyr trp select pattern color red pattern = phe tyr trp / arg lys asp glu asn gln select pattern color yellow position -60 90 600 # (18) 1T16: load 1t16.pdb backbone 2 color cyan-blue pattern = arg lys asp glu asn gln / phe tyr trp select pattern color red pattern = phe tyr trp / arg lys asp glu asn gln select pattern color yellow position 0 90 600 # Switch refreshing on: refresh on # Group all structures: group all