Sophie

Sophie

distrib > Mandriva > cooker > i586 > by-pkgid > eede1088262777189a3d3f16cb3dc560 > files > 110

garlic-1.6-6.i586.rpm

<html>

<head>
<title>
MOV, MOVE
</title>
</head>

<h1 align=center>

MOV, MOVE

</h1>

<hr size="3">

<font color=#880000>
<b>
NAME
<br>
</b>
</font>


MOV, MOVE - define which object should be moved.
<br><br>


<font color=#880000>
<b>
SYNOPSIS
<br>
</b>
</font>


MOV STR
<br>
MOV MEM
<br>
MOV PLA
<br>
MOV ALL
<br>
MOVE STRUCTURE
<br>
MOVE MEMBRANE
<br>
MOVE PLANE
<br>
MOVE ALL
<br><br>


<font color=#880000>
<b>
DESCRIPTION
<br>
</b>
</font>


This command defines which object should be moved when rotation and
translation controls or commands are used. When a PDB file is read, a new
structure is stored into program memory. A single plane (initially invisible)
is associated with each structure. On request (after the first execution of
the command MEMBRANE), a single membrane may also be added to the structure.
By default, the movement controls are affecting both the atomic structure
and the associated objects (the plane and the membrane, if initialized).
The command MOV (MOVE) may be used to change the action of the movement
controls, to move only the choosen object.
<br><br>

The command MOVE affects only the molecule which is currently being handled
(the structure which is "caught").
<br><br>

<font color=#880000>
<b>
KEYWORDS
<br>
</b>
</font>

<table border=2 cellspacing=2 cellpading=0>

<td align="left">

KEYWORD
<br>
(SHORT)

</td>

<td align="left">

KEYWORD
<br>
(LONG)

</td>

<td align="left">

DESCRIPTION

</td>

<tr>

<td align="left">

STR

</td>

<td align="left">

STRUCTURE

</td>

<td align="left">

Move only the structure (atoms), leaving the
<br>
plane and the membrane at the current position.

</td>

<tr>

<td align="left">

MEM

</td>

<td align="left">

MEMBRANE

</td>

<td align="left">

Move only the membrane, leaving the structure
<br>
(atoms) and the plane at the current position.

</td>

<tr>


<td align="left">

PLA

</td>

<td align="left">

PLANE

</td>

<td align="left">

Move only the plane, leaving the structure
<br>
(atoms) and the membrane at the current position.

</td>

<tr>

<td align="left">

ALL

</td>

<td align="left">

ALL

</td>

<td align="left">

Move all (atoms + plane + membrane).

</td>

</table>

<br>

<font color=#880000>
<b>
EXAMPLES
<br>
</b>
</font>

<table border=2 cellspacing=2 cellpading=0>

<td align="left">

COMMAND

</td>

<td align="left">

DESCRIPTION

</td>

<tr>

<td align="left">

mov pla
<br>

</td>

<td align="left">

Move the plane leaving the structure
<br>
and the membrane at the current position.

</td>

<tr>

<td align="left">

mov all

</td>

<td align="left">

Move structure, plane and membrane.
<br>
This is default action.

</td>

</table>

<br>

<font color=#880000>
<b>
NOTES
<br>
</b>
</font>


(1) The plane and the membrane are affected by rotation and translation
controls and commands. Slab and color fading do not affect these objects.
<br><br>

(2) Never use two keywords with the command MOVE! If you want to move the
plane and the membrane, for example, you should move it one by one!
<br><br>


<font color=#880000>
<b>
RELATED COMMANDS
<br>
</b>
</font>


PLA (PLANE) is used to manipulate the plane associated with the molecular
structure. MEM (MEMBRANE) is used to generate and manipulate the membrane.
CATCH is used to catch the specified structure.
<br><br>


<hr size="3">

</html>