<?xml version="1.0" encoding="ascii"?> <!DOCTYPE html PUBLIC "-//W3C//DTD XHTML 1.0 Transitional//EN" "DTD/xhtml1-transitional.dtd"> <html xmlns="http://www.w3.org/1999/xhtml" xml:lang="en" lang="en"> <head> <title>Bio.MetaTool._RecordConsumer</title> <link rel="stylesheet" href="epydoc.css" type="text/css" /> <script type="text/javascript" src="epydoc.js"></script> </head> <body bgcolor="white" text="black" link="blue" vlink="#204080" alink="#204080"> <!-- ==================== NAVIGATION BAR ==================== --> <table class="navbar" border="0" width="100%" cellpadding="0" bgcolor="#a0c0ff" cellspacing="0"> <tr valign="middle"> <!-- Tree link --> <th> <a href="module-tree.html">Trees</a> </th> <!-- Index link --> <th> <a href="identifier-index.html">Indices</a> </th> <!-- Help link --> <th> <a href="help.html">Help</a> </th> <th class="navbar" width="100%"></th> </tr> </table> <table width="100%" cellpadding="0" cellspacing="0"> <tr valign="top"> <td width="100%"> <span class="breadcrumbs"> Bio :: MetaTool :: _RecordConsumer :: Class _RecordConsumer </span> </td> <td> <table cellpadding="0" cellspacing="0"> <!-- hide/show private --> <tr><td align="right"><span class="options">[<a href="javascript:void(0);" class="privatelink" onclick="toggle_private();">hide private</a>]</span></td></tr> <tr><td align="right"><span class="options" >[<a href="frames.html" target="_top">frames</a >] | <a href="Bio.MetaTool._RecordConsumer-class.html" target="_top">no frames</a>]</span></td></tr> </table> </td> </tr> </table> <!-- ==================== CLASS DESCRIPTION ==================== --> <h1 class="epydoc">Class _RecordConsumer</h1><p class="nomargin-top"><span class="codelink"><a href="Bio.MetaTool-pysrc.html#_RecordConsumer">source code</a></span></p> <p>Create a MetaTool Record object from scanner generated information.</p> <!-- ==================== INSTANCE METHODS ==================== --> <a name="section-InstanceMethods"></a> <table class="summary" border="1" cellpadding="3" cellspacing="0" width="100%" bgcolor="white"> <tr bgcolor="#70b0f0" class="table-header"> <td colspan="2" class="table-header"> <table border="0" cellpadding="0" cellspacing="0" width="100%"> <tr valign="top"> <td align="left"><span class="table-header">Instance Methods</span></td> <td align="right" valign="top" ><span class="options">[<a href="#section-InstanceMethods" class="privatelink" onclick="toggle_private();" >hide private</a>]</span></td> </tr> </table> </td> </tr> <tr> <td width="15%" align="right" valign="top" class="summary"> <span class="summary-type"> </span> </td><td class="summary"> <table width="100%" cellpadding="0" cellspacing="0" border="0"> <tr> <td><span class="summary-sig"><a name="__init__"></a><span class="summary-sig-name">__init__</span>(<span class="summary-sig-arg">self</span>)</span></td> <td align="right" valign="top"> <span class="codelink"><a href="Bio.MetaTool-pysrc.html#_RecordConsumer.__init__">source code</a></span> </td> </tr> </table> </td> </tr> <tr> <td width="15%" align="right" valign="top" class="summary"> <span class="summary-type"> </span> </td><td class="summary"> <table width="100%" cellpadding="0" cellspacing="0" border="0"> <tr> <td><span class="summary-sig"><a name="input_file_name"></a><span class="summary-sig-name">input_file_name</span>(<span class="summary-sig-arg">self</span>, <span class="summary-sig-arg">content</span>)</span></td> <td align="right" valign="top"> <span class="codelink"><a href="Bio.MetaTool-pysrc.html#_RecordConsumer.input_file_name">source code</a></span> </td> </tr> </table> </td> </tr> <tr> <td width="15%" align="right" valign="top" class="summary"> <span class="summary-type"> </span> </td><td class="summary"> <table width="100%" cellpadding="0" cellspacing="0" border="0"> <tr> <td><span class="summary-sig"><a name="input_file_tag"></a><span class="summary-sig-name">input_file_tag</span>(<span class="summary-sig-arg">self</span>, <span class="summary-sig-arg">content</span>)</span></td> <td align="right" valign="top"> <span class="codelink"><a href="Bio.MetaTool-pysrc.html#_RecordConsumer.input_file_tag">source code</a></span> </td> </tr> </table> </td> </tr> <tr> <td width="15%" align="right" valign="top" class="summary"> <span class="summary-type"> </span> </td><td class="summary"> <table width="100%" cellpadding="0" cellspacing="0" border="0"> <tr> <td><span class="summary-sig"><a name="metabolite_count_tag"></a><span class="summary-sig-name">metabolite_count_tag</span>(<span class="summary-sig-arg">self</span>, <span class="summary-sig-arg">content</span>)</span></td> <td align="right" valign="top"> <span class="codelink"><a href="Bio.MetaTool-pysrc.html#_RecordConsumer.metabolite_count_tag">source code</a></span> </td> </tr> </table> </td> </tr> <tr> <td width="15%" align="right" valign="top" class="summary"> <span class="summary-type"> </span> </td><td class="summary"> <table width="100%" cellpadding="0" cellspacing="0" border="0"> <tr> <td><span class="summary-sig"><a name="reaction_count_tag"></a><span class="summary-sig-name">reaction_count_tag</span>(<span class="summary-sig-arg">self</span>, <span class="summary-sig-arg">content</span>)</span></td> <td align="right" valign="top"> <span class="codelink"><a href="Bio.MetaTool-pysrc.html#_RecordConsumer.reaction_count_tag">source code</a></span> </td> </tr> </table> </td> </tr> <tr> <td width="15%" align="right" valign="top" class="summary"> <span class="summary-type"> </span> </td><td class="summary"> <table width="100%" cellpadding="0" cellspacing="0" border="0"> <tr> <td><span class="summary-sig"><a name="matrix_row"></a><span class="summary-sig-name">matrix_row</span>(<span class="summary-sig-arg">self</span>, <span class="summary-sig-arg">matrix_rows</span>)</span></td> <td align="right" valign="top"> <span class="codelink"><a href="Bio.MetaTool-pysrc.html#_RecordConsumer.matrix_row">source code</a></span> </td> </tr> </table> </td> </tr> <tr> <td width="15%" align="right" valign="top" class="summary"> <span class="summary-type"> </span> </td><td class="summary"> <table width="100%" cellpadding="0" cellspacing="0" border="0"> <tr> <td><span class="summary-sig"><a name="unbalanced_metabolite"></a><span class="summary-sig-name">unbalanced_metabolite</span>(<span class="summary-sig-arg">self</span>, <span class="summary-sig-arg">content</span>)</span></td> <td align="right" valign="top"> <span class="codelink"><a href="Bio.MetaTool-pysrc.html#_RecordConsumer.unbalanced_metabolite">source code</a></span> </td> </tr> </table> </td> </tr> <tr> <td width="15%" align="right" valign="top" class="summary"> <span class="summary-type"> </span> </td><td class="summary"> <table width="100%" cellpadding="0" cellspacing="0" border="0"> <tr> <td><span class="summary-sig"><a name="branch_metabolite"></a><span class="summary-sig-name">branch_metabolite</span>(<span class="summary-sig-arg">self</span>, <span class="summary-sig-arg">content</span>)</span></td> <td align="right" valign="top"> <span class="codelink"><a href="Bio.MetaTool-pysrc.html#_RecordConsumer.branch_metabolite">source code</a></span> </td> </tr> </table> </td> </tr> <tr> <td width="15%" align="right" valign="top" class="summary"> <span class="summary-type"> </span> </td><td class="summary"> <table width="100%" cellpadding="0" cellspacing="0" border="0"> <tr> <td><span class="summary-sig"><a name="non_branch_metabolite"></a><span class="summary-sig-name">non_branch_metabolite</span>(<span class="summary-sig-arg">self</span>, <span class="summary-sig-arg">content</span>)</span></td> <td align="right" valign="top"> <span class="codelink"><a href="Bio.MetaTool-pysrc.html#_RecordConsumer.non_branch_metabolite">source code</a></span> </td> </tr> </table> </td> </tr> <tr> <td width="15%" align="right" valign="top" class="summary"> <span class="summary-type"> </span> </td><td class="summary"> <table width="100%" cellpadding="0" cellspacing="0" border="0"> <tr> <td><span class="summary-sig"><a name="stoichiometric_tag"></a><span class="summary-sig-name">stoichiometric_tag</span>(<span class="summary-sig-arg">self</span>, <span class="summary-sig-arg">content</span>)</span></td> <td align="right" valign="top"> <span class="codelink"><a href="Bio.MetaTool-pysrc.html#_RecordConsumer.stoichiometric_tag">source code</a></span> </td> </tr> </table> </td> </tr> <tr> <td width="15%" align="right" valign="top" class="summary"> <span class="summary-type"> </span> </td><td class="summary"> <table width="100%" cellpadding="0" cellspacing="0" border="0"> <tr> <td><span class="summary-sig"><a name="kernel_tag"></a><span class="summary-sig-name">kernel_tag</span>(<span class="summary-sig-arg">self</span>, <span class="summary-sig-arg">kernel_tag</span>)</span></td> <td align="right" valign="top"> <span class="codelink"><a href="Bio.MetaTool-pysrc.html#_RecordConsumer.kernel_tag">source code</a></span> </td> </tr> </table> </td> </tr> <tr> <td width="15%" align="right" valign="top" class="summary"> <span class="summary-type"> </span> </td><td class="summary"> <table width="100%" cellpadding="0" cellspacing="0" border="0"> <tr> <td><span class="summary-sig"><a name="subsets_tag"></a><span class="summary-sig-name">subsets_tag</span>(<span class="summary-sig-arg">self</span>, <span class="summary-sig-arg">content</span>)</span></td> <td align="right" valign="top"> <span class="codelink"><a href="Bio.MetaTool-pysrc.html#_RecordConsumer.subsets_tag">source code</a></span> </td> </tr> </table> </td> </tr> <tr> <td width="15%" align="right" valign="top" class="summary"> <span class="summary-type"> </span> </td><td class="summary"> <table width="100%" cellpadding="0" cellspacing="0" border="0"> <tr> <td><span class="summary-sig"><a name="reduced_system_tag"></a><span class="summary-sig-name">reduced_system_tag</span>(<span class="summary-sig-arg">self</span>, <span class="summary-sig-arg">content</span>)</span></td> <td align="right" valign="top"> <span class="codelink"><a href="Bio.MetaTool-pysrc.html#_RecordConsumer.reduced_system_tag">source code</a></span> </td> </tr> </table> </td> </tr> <tr> <td width="15%" align="right" valign="top" class="summary"> <span class="summary-type"> </span> </td><td class="summary"> <table width="100%" cellpadding="0" cellspacing="0" border="0"> <tr> <td><span class="summary-sig"><a name="convex_basis_tag"></a><span class="summary-sig-name">convex_basis_tag</span>(<span class="summary-sig-arg">self</span>, <span class="summary-sig-arg">content</span>)</span></td> <td align="right" valign="top"> <span class="codelink"><a href="Bio.MetaTool-pysrc.html#_RecordConsumer.convex_basis_tag">source code</a></span> </td> </tr> </table> </td> </tr> <tr> <td width="15%" align="right" valign="top" class="summary"> <span class="summary-type"> </span> </td><td class="summary"> <table width="100%" cellpadding="0" cellspacing="0" border="0"> <tr> <td><span class="summary-sig"><a name="conservation_relations_tag"></a><span class="summary-sig-name">conservation_relations_tag</span>(<span class="summary-sig-arg">self</span>, <span class="summary-sig-arg">content</span>)</span></td> <td align="right" valign="top"> <span class="codelink"><a href="Bio.MetaTool-pysrc.html#_RecordConsumer.conservation_relations_tag">source code</a></span> </td> </tr> </table> </td> </tr> <tr> <td width="15%" align="right" valign="top" class="summary"> <span class="summary-type"> </span> </td><td class="summary"> <table width="100%" cellpadding="0" cellspacing="0" border="0"> <tr> <td><span class="summary-sig"><a name="elementary_modes_tag"></a><span class="summary-sig-name">elementary_modes_tag</span>(<span class="summary-sig-arg">self</span>, <span class="summary-sig-arg">content</span>)</span></td> <td align="right" valign="top"> <span class="codelink"><a href="Bio.MetaTool-pysrc.html#_RecordConsumer.elementary_modes_tag">source code</a></span> </td> </tr> </table> </td> </tr> <tr> <td width="15%" align="right" valign="top" class="summary"> <span class="summary-type"> </span> </td><td class="summary"> <table width="100%" cellpadding="0" cellspacing="0" border="0"> <tr> <td><span class="summary-sig"><a name="metabolite_line"></a><span class="summary-sig-name">metabolite_line</span>(<span class="summary-sig-arg">self</span>, <span class="summary-sig-arg">content</span>)</span></td> <td align="right" valign="top"> <span class="codelink"><a href="Bio.MetaTool-pysrc.html#_RecordConsumer.metabolite_line">source code</a></span> </td> </tr> </table> </td> </tr> <tr> <td width="15%" align="right" valign="top" class="summary"> <span class="summary-type"> </span> </td><td class="summary"> <table width="100%" cellpadding="0" cellspacing="0" border="0"> <tr> <td><span class="summary-sig"><a name="num_int_metabolites"></a><span class="summary-sig-name">num_int_metabolites</span>(<span class="summary-sig-arg">self</span>, <span class="summary-sig-arg">content</span>)</span></td> <td align="right" valign="top"> <span class="codelink"><a href="Bio.MetaTool-pysrc.html#_RecordConsumer.num_int_metabolites">source code</a></span> </td> </tr> </table> </td> </tr> <tr> <td width="15%" align="right" valign="top" class="summary"> <span class="summary-type"> </span> </td><td class="summary"> <table width="100%" cellpadding="0" cellspacing="0" border="0"> <tr> <td><span class="summary-sig"><a name="num_reactions"></a><span class="summary-sig-name">num_reactions</span>(<span class="summary-sig-arg">self</span>, <span class="summary-sig-arg">content</span>)</span></td> <td align="right" valign="top"> <span class="codelink"><a href="Bio.MetaTool-pysrc.html#_RecordConsumer.num_reactions">source code</a></span> </td> </tr> </table> </td> </tr> <tr> <td width="15%" align="right" valign="top" class="summary"> <span class="summary-type"> </span> </td><td class="summary"> <table width="100%" cellpadding="0" cellspacing="0" border="0"> <tr> <td><span class="summary-sig"><a name="irreversible_vector"></a><span class="summary-sig-name">irreversible_vector</span>(<span class="summary-sig-arg">self</span>, <span class="summary-sig-arg">content</span>)</span></td> <td align="right" valign="top"> <span class="codelink"><a href="Bio.MetaTool-pysrc.html#_RecordConsumer.irreversible_vector">source code</a></span> </td> </tr> </table> </td> </tr> <tr> <td width="15%" align="right" valign="top" class="summary"> <span class="summary-type"> </span> </td><td class="summary"> <table width="100%" cellpadding="0" cellspacing="0" border="0"> <tr> <td><span class="summary-sig"><a name="reaction"></a><span class="summary-sig-name">reaction</span>(<span class="summary-sig-arg">self</span>, <span class="summary-sig-arg">reactions</span>)</span></td> <td align="right" valign="top"> <span class="codelink"><a href="Bio.MetaTool-pysrc.html#_RecordConsumer.reaction">source code</a></span> </td> </tr> </table> </td> </tr> <tr> <td width="15%" align="right" valign="top" class="summary"> <span class="summary-type"> </span> </td><td class="summary"> <table width="100%" cellpadding="0" cellspacing="0" border="0"> <tr> <td><span class="summary-sig"><a name="enzyme"></a><span class="summary-sig-name">enzyme</span>(<span class="summary-sig-arg">self</span>, <span class="summary-sig-arg">enzymes</span>)</span></td> <td align="right" valign="top"> <span class="codelink"><a href="Bio.MetaTool-pysrc.html#_RecordConsumer.enzyme">source code</a></span> </td> </tr> </table> </td> </tr> <tr> <td width="15%" align="right" valign="top" class="summary"> <span class="summary-type"> </span> </td><td class="summary"> <table width="100%" cellpadding="0" cellspacing="0" border="0"> <tr> <td><span class="summary-sig"><a name="sum_is_constant_line"></a><span class="summary-sig-name">sum_is_constant_line</span>(<span class="summary-sig-arg">self</span>, <span class="summary-sig-arg">lines</span>)</span></td> <td align="right" valign="top"> <span class="codelink"><a href="Bio.MetaTool-pysrc.html#_RecordConsumer.sum_is_constant_line">source code</a></span> </td> </tr> </table> </td> </tr> <tr> <td width="15%" align="right" valign="top" class="summary"> <span class="summary-type"> </span> </td><td class="summary"> <table width="100%" cellpadding="0" cellspacing="0" border="0"> <tr> <td><span class="summary-sig"><a name="num_rows"></a><span class="summary-sig-name">num_rows</span>(<span class="summary-sig-arg">self</span>, <span class="summary-sig-arg">num_rows</span>)</span></td> <td align="right" valign="top"> <span class="codelink"><a href="Bio.MetaTool-pysrc.html#_RecordConsumer.num_rows">source code</a></span> </td> </tr> </table> </td> </tr> <tr> <td width="15%" align="right" valign="top" class="summary"> <span class="summary-type"> </span> </td><td class="summary"> <table width="100%" cellpadding="0" cellspacing="0" border="0"> <tr> <td><span class="summary-sig"><a name="num_cols"></a><span class="summary-sig-name">num_cols</span>(<span class="summary-sig-arg">self</span>, <span class="summary-sig-arg">num_cols</span>)</span></td> <td align="right" valign="top"> <span class="codelink"><a href="Bio.MetaTool-pysrc.html#_RecordConsumer.num_cols">source code</a></span> </td> </tr> </table> </td> </tr> <tr> <td width="15%" align="right" valign="top" class="summary"> <span class="summary-type"> </span> </td><td class="summary"> <table width="100%" cellpadding="0" cellspacing="0" border="0"> <tr> <td><span class="summary-sig"><a name="metabolite_roles"></a><span class="summary-sig-name">metabolite_roles</span>(<span class="summary-sig-arg">self</span>, <span class="summary-sig-arg">content</span>)</span></td> <td align="right" valign="top"> <span class="codelink"><a href="Bio.MetaTool-pysrc.html#_RecordConsumer.metabolite_roles">source code</a></span> </td> </tr> </table> </td> </tr> <tr> <td width="15%" align="right" valign="top" class="summary"> <span class="summary-type"> </span> </td><td class="summary"> <table width="100%" cellpadding="0" cellspacing="0" border="0"> <tr> <td><span class="summary-sig"><a name="end_stochiometric"></a><span class="summary-sig-name">end_stochiometric</span>(<span class="summary-sig-arg">self</span>, <span class="summary-sig-arg">content</span>)</span></td> <td align="right" valign="top"> <span class="codelink"><a href="Bio.MetaTool-pysrc.html#_RecordConsumer.end_stochiometric">source code</a></span> </td> </tr> </table> </td> </tr> <tr> <td width="15%" align="right" valign="top" class="summary"> <span class="summary-type"> </span> </td><td class="summary"> <table width="100%" cellpadding="0" cellspacing="0" border="0"> <tr> <td><span class="summary-sig"><a name="end_kernel"></a><span class="summary-sig-name">end_kernel</span>(<span class="summary-sig-arg">self</span>, <span class="summary-sig-arg">content</span>)</span></td> <td align="right" valign="top"> <span class="codelink"><a href="Bio.MetaTool-pysrc.html#_RecordConsumer.end_kernel">source code</a></span> </td> </tr> </table> </td> </tr> <tr> <td width="15%" align="right" valign="top" class="summary"> <span class="summary-type"> </span> </td><td class="summary"> <table width="100%" cellpadding="0" cellspacing="0" border="0"> <tr> <td><span class="summary-sig"><a name="end_subsets"></a><span class="summary-sig-name">end_subsets</span>(<span class="summary-sig-arg">self</span>, <span class="summary-sig-arg">content</span>)</span></td> <td align="right" valign="top"> <span class="codelink"><a href="Bio.MetaTool-pysrc.html#_RecordConsumer.end_subsets">source code</a></span> </td> </tr> </table> </td> </tr> <tr> <td width="15%" align="right" valign="top" class="summary"> <span class="summary-type"> </span> </td><td class="summary"> <table width="100%" cellpadding="0" cellspacing="0" border="0"> <tr> <td><span class="summary-sig"><a name="end_reduced_system"></a><span class="summary-sig-name">end_reduced_system</span>(<span class="summary-sig-arg">self</span>, <span class="summary-sig-arg">content</span>)</span></td> <td align="right" valign="top"> <span class="codelink"><a href="Bio.MetaTool-pysrc.html#_RecordConsumer.end_reduced_system">source code</a></span> </td> </tr> </table> </td> </tr> <tr> <td width="15%" align="right" valign="top" class="summary"> <span class="summary-type"> </span> </td><td class="summary"> <table width="100%" cellpadding="0" cellspacing="0" border="0"> <tr> <td><span class="summary-sig"><a name="end_convex_basis"></a><span class="summary-sig-name">end_convex_basis</span>(<span class="summary-sig-arg">self</span>, <span class="summary-sig-arg">content</span>)</span></td> <td align="right" valign="top"> <span class="codelink"><a href="Bio.MetaTool-pysrc.html#_RecordConsumer.end_convex_basis">source code</a></span> </td> </tr> </table> </td> </tr> <tr> <td width="15%" align="right" valign="top" class="summary"> <span class="summary-type"> </span> </td><td class="summary"> <table width="100%" cellpadding="0" cellspacing="0" border="0"> <tr> <td><span class="summary-sig"><a name="end_conservation_relations"></a><span class="summary-sig-name">end_conservation_relations</span>(<span class="summary-sig-arg">self</span>, <span class="summary-sig-arg">content</span>)</span></td> <td align="right" valign="top"> <span class="codelink"><a href="Bio.MetaTool-pysrc.html#_RecordConsumer.end_conservation_relations">source code</a></span> </td> </tr> </table> </td> </tr> <tr> <td width="15%" align="right" valign="top" class="summary"> <span class="summary-type"> </span> </td><td class="summary"> <table width="100%" cellpadding="0" cellspacing="0" border="0"> <tr> <td><span class="summary-sig"><a name="end_elementary_modes"></a><span class="summary-sig-name">end_elementary_modes</span>(<span class="summary-sig-arg">self</span>, <span class="summary-sig-arg">content</span>)</span></td> <td align="right" valign="top"> <span class="codelink"><a href="Bio.MetaTool-pysrc.html#_RecordConsumer.end_elementary_modes">source code</a></span> </td> </tr> </table> </td> </tr> </table> <!-- ==================== NAVIGATION BAR ==================== --> <table class="navbar" border="0" width="100%" cellpadding="0" bgcolor="#a0c0ff" cellspacing="0"> <tr valign="middle"> <!-- Tree link --> <th> <a href="module-tree.html">Trees</a> </th> <!-- Index link --> <th> <a href="identifier-index.html">Indices</a> </th> <!-- Help link --> <th> <a href="help.html">Help</a> </th> <th class="navbar" width="100%"></th> </tr> </table> <table border="0" cellpadding="0" cellspacing="0" width="100%%"> <tr> <td align="left" class="footer"> Generated by Epydoc 3.0.1 on Mon Sep 15 09:26:35 2008 </td> <td align="right" class="footer"> <a target="mainFrame" href="http://epydoc.sourceforge.net" >http://epydoc.sourceforge.net</a> </td> </tr> </table> <script 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