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Bio ::
GFF ::
easy ::
LocationFromCoords ::
Class LocationFromCoords
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<!-- ==================== CLASS DESCRIPTION ==================== -->
<h1 class="epydoc">Class LocationFromCoords</h1><p class="nomargin-top"><span class="codelink"><a href="Bio.GFF.easy-pysrc.html#LocationFromCoords">source code</a></span></p>
<pre class="base-tree">
object --+
|
list --+
|
<a href="Bio.GFF.GenericTools.VerboseList-class.html">GenericTools.VerboseList</a> --+
|
<a href="Bio.GFF.easy.Location-class.html">Location</a> --+
|
<strong class="uidshort">LocationFromCoords</strong>
</pre>
<hr />
<pre class="py-doctest">
<span class="py-prompt">>>> </span><span class="py-keyword">print</span> LocationFromCoords(339, 564)
<span class="py-output">340..565</span>
<span class="py-output"></span><span class="py-prompt">>>> </span><span class="py-keyword">print</span> LocationFromCoords(339, 564, seqname=<span class="py-string">"I"</span>)
<span class="py-output">I:340..565</span>
<span class="py-output"></span><span class="py-prompt">>>> </span><span class="py-keyword">print</span> LocationFromCoords(999, 3234, <span class="py-string">"-"</span>, seqname=<span class="py-string">"NC_343434"</span>)
<span class="py-output">NC_343434:complement(1000..3235)</span></pre>
<!-- ==================== INSTANCE METHODS ==================== -->
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<span class="summary-type">new list</span>
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<td><span class="summary-sig"><a href="Bio.GFF.easy.LocationFromCoords-class.html#__init__" class="summary-sig-name">__init__</a>(<span class="summary-sig-arg">self</span>,
<span class="summary-sig-arg">start</span>,
<span class="summary-sig-arg">end</span>,
<span class="summary-sig-arg">strand</span>=<span class="summary-sig-default">0</span>,
<span class="summary-sig-arg">seqname</span>=<span class="summary-sig-default">None</span>)</span><br />
x.__init__(...) initializes x; see x.__class__.__doc__ for signature</td>
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<span class="codelink"><a href="Bio.GFF.easy-pysrc.html#LocationFromCoords.__init__">source code</a></span>
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<p class="indent-wrapped-lines"><b>Inherited from <code><a href="Bio.GFF.easy.Location-class.html">Location</a></code></b>:
<code><a href="Bio.GFF.easy.Location-class.html#__add__">__add__</a></code>,
<code><a href="Bio.GFF.easy.Location-class.html#__repr__">__repr__</a></code>,
<code><a href="Bio.GFF.easy.Location-class.html#__str__">__str__</a></code>,
<code><a href="Bio.GFF.easy.Location-class.html#__sub__">__sub__</a></code>,
<code><a href="Bio.GFF.easy.Location-class.html#add">add</a></code>,
<code><a href="Bio.GFF.easy.Location-class.html#bounding">bounding</a></code>,
<code><a href="Bio.GFF.easy.Location-class.html#direction_and_index">direction_and_index</a></code>,
<code><a href="Bio.GFF.easy.Location-class.html#end">end</a></code>,
<code><a href="Bio.GFF.easy.Location-class.html#findseqname">findseqname</a></code>,
<code><a href="Bio.GFF.easy.Location-class.html#findseqname_3prime">findseqname_3prime</a></code>,
<code><a href="Bio.GFF.easy.Location-class.html#findside">findside</a></code>,
<code><a href="Bio.GFF.easy.Location-class.html#five_prime">five_prime</a></code>,
<code><a href="Bio.GFF.easy.Location-class.html#intersection">intersection</a></code>,
<code><a href="Bio.GFF.easy.Location-class.html#length">length</a></code>,
<code><a href="Bio.GFF.easy.Location-class.html#reorient">reorient</a></code>,
<code><a href="Bio.GFF.easy.Location-class.html#reverse">reverse</a></code>,
<code><a href="Bio.GFF.easy.Location-class.html#start">start</a></code>,
<code><a href="Bio.GFF.easy.Location-class.html#sublocation">sublocation</a></code>,
<code><a href="Bio.GFF.easy.Location-class.html#three_prime">three_prime</a></code>,
<code><a href="Bio.GFF.easy.Location-class.html#three_prime_range">three_prime_range</a></code>
</p>
<div class="private"> <p class="indent-wrapped-lines"><b>Inherited from <code><a href="Bio.GFF.easy.Location-class.html">Location</a></code></b> (private):
<code><a href="Bio.GFF.easy.Location-class.html#_joinstr" onclick="show_private();">_joinstr</a></code>
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<p class="indent-wrapped-lines"><b>Inherited from <code>list</code></b>:
<code>__contains__</code>,
<code>__delitem__</code>,
<code>__delslice__</code>,
<code>__eq__</code>,
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<code>count</code>,
<code>extend</code>,
<code>index</code>,
<code>insert</code>,
<code>pop</code>,
<code>remove</code>,
<code>sort</code>
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<p class="indent-wrapped-lines"><b>Inherited from <code>object</code></b>:
<code>__delattr__</code>,
<code>__reduce__</code>,
<code>__reduce_ex__</code>,
<code>__setattr__</code>
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<p class="indent-wrapped-lines"><b>Inherited from <code><a href="Bio.GFF.easy.Location-class.html">Location</a></code></b>:
<code><a href="Bio.GFF.easy.Location-class.html#direction2index">direction2index</a></code>
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<h3 class="epydoc"><span class="sig"><span class="sig-name">__init__</span>(<span class="sig-arg">self</span>,
<span class="sig-arg">start</span>,
<span class="sig-arg">end</span>,
<span class="sig-arg">strand</span>=<span class="sig-default">0</span>,
<span class="sig-arg">seqname</span>=<span class="sig-default">None</span>)</span>
<br /><em class="fname">(Constructor)</em>
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</td><td align="right" valign="top"
><span class="codelink"><a href="Bio.GFF.easy-pysrc.html#LocationFromCoords.__init__">source code</a></span>
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<p>x.__init__(...) initializes x; see x.__class__.__doc__ for
signature</p>
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<dt>Returns: new list</dt>
<dt>Overrides:
object.__init__
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