<?xml version="1.0" encoding="ascii"?> <!DOCTYPE html PUBLIC "-//W3C//DTD XHTML 1.0 Transitional//EN" "DTD/xhtml1-transitional.dtd"> <html xmlns="http://www.w3.org/1999/xhtml" xml:lang="en" lang="en"> <head> <title>hmmpfam</title> <link rel="stylesheet" href="epydoc.css" type="text/css" /> <script type="text/javascript" src="epydoc.js"></script> </head> <body bgcolor="white" text="black" link="blue" vlink="#204080" alink="#204080"> <h1 class="toc">Module hmmpfam</h1> <hr /> <h2 class="toc">Variables</h2> <a target="mainFrame" href="Bio.expressions.hmmpfam-module.html#__warningregistry__" >__warningregistry__</a><br /> <a target="mainFrame" href="Bio.expressions.hmmpfam-module.html#alignment_header" >alignment_header</a><br /> <a target="mainFrame" href="Bio.expressions.hmmpfam-module.html#copyright" >copyright</a><br /> <a target="mainFrame" href="Bio.expressions.hmmpfam-module.html#domain_align_bottom" >domain_align_bottom</a><br /> <a target="mainFrame" href="Bio.expressions.hmmpfam-module.html#domain_align_header" >domain_align_header</a><br /> <a target="mainFrame" href="Bio.expressions.hmmpfam-module.html#domain_align_middle" >domain_align_middle</a><br /> <a target="mainFrame" href="Bio.expressions.hmmpfam-module.html#domain_align_top" >domain_align_top</a><br /> <a target="mainFrame" href="Bio.expressions.hmmpfam-module.html#domain_alignment" >domain_alignment</a><br /> <a target="mainFrame" href="Bio.expressions.hmmpfam-module.html#domain_header" >domain_header</a><br /> <a target="mainFrame" href="Bio.expressions.hmmpfam-module.html#domain_hit_line" >domain_hit_line</a><br /> <a target="mainFrame" href="Bio.expressions.hmmpfam-module.html#family_header" >family_header</a><br /> <a target="mainFrame" href="Bio.expressions.hmmpfam-module.html#family_hit_line" >family_hit_line</a><br /> <a target="mainFrame" href="Bio.expressions.hmmpfam-module.html#files" >files</a><br /> <a target="mainFrame" href="Bio.expressions.hmmpfam-module.html#format" >format</a><br /> <a target="mainFrame" href="Bio.expressions.hmmpfam-module.html#header" >header</a><br /> <a target="mainFrame" href="Bio.expressions.hmmpfam-module.html#match_symbols" >match_symbols</a><br /> <a target="mainFrame" href="Bio.expressions.hmmpfam-module.html#model_name" >model_name</a><br /> <a target="mainFrame" href="Bio.expressions.hmmpfam-module.html#no_hit_line" >no_hit_line</a><br /> <a target="mainFrame" href="Bio.expressions.hmmpfam-module.html#program_description" >program_description</a><br /> <a target="mainFrame" href="Bio.expressions.hmmpfam-module.html#program_version" >program_version</a><br /> <a target="mainFrame" href="Bio.expressions.hmmpfam-module.html#record" >record</a><br /> <a target="mainFrame" href="Bio.expressions.hmmpfam-module.html#record_end" >record_end</a><br /> <a target="mainFrame" href="Bio.expressions.hmmpfam-module.html#rf_line" >rf_line</a><br /> <a target="mainFrame" href="Bio.expressions.hmmpfam-module.html#sequence_info" >sequence_info</a><br /> <a target="mainFrame" href="Bio.expressions.hmmpfam-module.html#symbol_forward" >symbol_forward</a><br /> <a target="mainFrame" href="Bio.expressions.hmmpfam-module.html#symbol_reverse" >symbol_reverse</a><br /><hr /> <span class="options">[<a href="javascript:void(0);" class="privatelink" onclick="toggle_private();">hide private</a>]</span> <script type="text/javascript"> <!-- // Private objects are initially displayed (because if // javascript is turned off then we want them to be // visible); but by default, we want to hide them. So hide // them unless we have a cookie that says to show them. checkCookie(); // --> </script> </body> </html>