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Sophie

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biopython-doc-1.47-2mdv2008.1.x86_64.rpm

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<h1 class="toc">Module Std</h1>
<hr />
  <h2 class="toc">Classes</h2>
    <a target="mainFrame" href="Bio.Std.StdTerm-class.html"
     >StdTerm</a><br />  <h2 class="toc">Functions</h2>
  <div class="private">
    <a target="mainFrame" href="Bio.Std-module.html#_check_attrs"
     >_check_attrs</a><br />  </div>
  <div class="private">
    <a target="mainFrame" href="Bio.Std-module.html#_check_gapchar"
     >_check_gapchar</a><br />  </div>
  <div class="private">
    <a target="mainFrame" href="Bio.Std-module.html#_check_name"
     >_check_name</a><br />  </div>
  <div class="private">
    <a target="mainFrame" href="Bio.Std-module.html#_complain_if_given"
     >_complain_if_given</a><br />  </div>
  <div class="private">
    <a target="mainFrame" href="Bio.Std-module.html#_must_have"
     >_must_have</a><br />  </div>
  <div class="private">
    <a target="mainFrame" href="Bio.Std-module.html#_must_have_set"
     >_must_have_set</a><br />  </div>
  <div class="private">
    <a target="mainFrame" href="Bio.Std-module.html#_must_not_have"
     >_must_not_have</a><br />  </div>
  <div class="private">
    <a target="mainFrame" href="Bio.Std-module.html#_set_if_given"
     >_set_if_given</a><br />  </div>
  <div class="private">
    <a target="mainFrame" href="Bio.Std-module.html#_settag"
     >_settag</a><br />  </div>
    <a target="mainFrame" href="Bio.Std-module.html#alphabet"
     >alphabet</a><br />    <a target="mainFrame" href="Bio.Std-module.html#application_name"
     >application_name</a><br />    <a target="mainFrame" href="Bio.Std-module.html#application_version"
     >application_version</a><br />    <a target="mainFrame" href="Bio.Std-module.html#database_name"
     >database_name</a><br />    <a target="mainFrame" href="Bio.Std-module.html#database_num_letters"
     >database_num_letters</a><br />    <a target="mainFrame" href="Bio.Std-module.html#database_num_sequences"
     >database_num_sequences</a><br />    <a target="mainFrame" href="Bio.Std-module.html#dbid"
     >dbid</a><br />    <a target="mainFrame" href="Bio.Std-module.html#dbxref"
     >dbxref</a><br />    <a target="mainFrame" href="Bio.Std-module.html#dbxref_dbid"
     >dbxref_dbid</a><br />    <a target="mainFrame" href="Bio.Std-module.html#dbxref_dbname"
     >dbxref_dbname</a><br />    <a target="mainFrame" href="Bio.Std-module.html#dbxref_negate"
     >dbxref_negate</a><br />    <a target="mainFrame" href="Bio.Std-module.html#description"
     >description</a><br />    <a target="mainFrame" href="Bio.Std-module.html#description_block"
     >description_block</a><br />    <a target="mainFrame" href="Bio.Std-module.html#description_line"
     >description_line</a><br />    <a target="mainFrame" href="Bio.Std-module.html#fast_dbxref"
     >fast_dbxref</a><br />    <a target="mainFrame" href="Bio.Std-module.html#feature"
     >feature</a><br />    <a target="mainFrame" href="Bio.Std-module.html#feature_block"
     >feature_block</a><br />    <a target="mainFrame" href="Bio.Std-module.html#feature_description"
     >feature_description</a><br />    <a target="mainFrame" href="Bio.Std-module.html#feature_location"
     >feature_location</a><br />    <a target="mainFrame" href="Bio.Std-module.html#feature_location_end"
     >feature_location_end</a><br />    <a target="mainFrame" href="Bio.Std-module.html#feature_location_start"
     >feature_location_start</a><br />    <a target="mainFrame" href="Bio.Std-module.html#feature_name"
     >feature_name</a><br />    <a target="mainFrame" href="Bio.Std-module.html#feature_qualifier"
     >feature_qualifier</a><br />    <a target="mainFrame" href="Bio.Std-module.html#feature_qualifier_description"
     >feature_qualifier_description</a><br />    <a target="mainFrame" href="Bio.Std-module.html#feature_qualifier_name"
     >feature_qualifier_name</a><br />    <a target="mainFrame" href="Bio.Std-module.html#hit"
     >hit</a><br />    <a target="mainFrame" href="Bio.Std-module.html#hit_description"
     >hit_description</a><br />    <a target="mainFrame" href="Bio.Std-module.html#hit_length"
     >hit_length</a><br />    <a target="mainFrame" href="Bio.Std-module.html#hsp"
     >hsp</a><br />    <a target="mainFrame" href="Bio.Std-module.html#hsp_frame"
     >hsp_frame</a><br />    <a target="mainFrame" href="Bio.Std-module.html#hsp_seqalign"
     >hsp_seqalign</a><br />    <a target="mainFrame" href="Bio.Std-module.html#hsp_seqalign_homology_seq"
     >hsp_seqalign_homology_seq</a><br />    <a target="mainFrame" href="Bio.Std-module.html#hsp_seqalign_query_end"
     >hsp_seqalign_query_end</a><br />    <a target="mainFrame" href="Bio.Std-module.html#hsp_seqalign_query_leader"
     >hsp_seqalign_query_leader</a><br />    <a target="mainFrame" href="Bio.Std-module.html#hsp_seqalign_query_name"
     >hsp_seqalign_query_name</a><br />    <a target="mainFrame" href="Bio.Std-module.html#hsp_seqalign_query_seq"
     >hsp_seqalign_query_seq</a><br />    <a target="mainFrame" href="Bio.Std-module.html#hsp_seqalign_query_start"
     >hsp_seqalign_query_start</a><br />    <a target="mainFrame" href="Bio.Std-module.html#hsp_seqalign_subject_end"
     >hsp_seqalign_subject_end</a><br />    <a target="mainFrame" href="Bio.Std-module.html#hsp_seqalign_subject_name"
     >hsp_seqalign_subject_name</a><br />    <a target="mainFrame" href="Bio.Std-module.html#hsp_seqalign_subject_seq"
     >hsp_seqalign_subject_seq</a><br />    <a target="mainFrame" href="Bio.Std-module.html#hsp_seqalign_subject_start"
     >hsp_seqalign_subject_start</a><br />    <a target="mainFrame" href="Bio.Std-module.html#hsp_strand"
     >hsp_strand</a><br />    <a target="mainFrame" href="Bio.Std-module.html#hsp_value"
     >hsp_value</a><br />    <a target="mainFrame" href="Bio.Std-module.html#query_description"
     >query_description</a><br />    <a target="mainFrame" href="Bio.Std-module.html#query_description_block"
     >query_description_block</a><br />    <a target="mainFrame" href="Bio.Std-module.html#query_size"
     >query_size</a><br />    <a target="mainFrame" href="Bio.Std-module.html#record"
     >record</a><br />    <a target="mainFrame" href="Bio.Std-module.html#search_header"
     >search_header</a><br />    <a target="mainFrame" href="Bio.Std-module.html#search_parameter"
     >search_parameter</a><br />    <a target="mainFrame" href="Bio.Std-module.html#search_statistic"
     >search_statistic</a><br />    <a target="mainFrame" href="Bio.Std-module.html#search_table"
     >search_table</a><br />    <a target="mainFrame" href="Bio.Std-module.html#search_table_description"
     >search_table_description</a><br />    <a target="mainFrame" href="Bio.Std-module.html#search_table_entry"
     >search_table_entry</a><br />    <a target="mainFrame" href="Bio.Std-module.html#search_table_value"
     >search_table_value</a><br />    <a target="mainFrame" href="Bio.Std-module.html#sequence"
     >sequence</a><br />    <a target="mainFrame" href="Bio.Std-module.html#sequence_block"
     >sequence_block</a><br />  <h2 class="toc">Variables</h2>
    <a target="mainFrame" href="Bio.Std-module.html#NS"
     >NS</a><br />    <a target="mainFrame" href="Bio.Std-module.html#XMLNS"
     >XMLNS</a><br />  <div class="private">
    <a target="mainFrame" href="Bio.Std-module.html#_use_hack"
     >_use_hack</a><br />  </div>
    <a target="mainFrame" href="Bio.Std-module.html#namespace"
     >namespace</a><br /><hr />
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