<?xml version="1.0" encoding="ascii"?> <!DOCTYPE html PUBLIC "-//W3C//DTD XHTML 1.0 Transitional//EN" "DTD/xhtml1-transitional.dtd"> <html xmlns="http://www.w3.org/1999/xhtml" xml:lang="en" lang="en"> <head> <title>Pattern</title> <link rel="stylesheet" href="epydoc.css" type="text/css" /> <script type="text/javascript" src="epydoc.js"></script> </head> <body bgcolor="white" text="black" link="blue" vlink="#204080" alink="#204080"> <h1 class="toc">Module Pattern</h1> <hr /> <h2 class="toc">Classes</h2> <a target="mainFrame" href="Bio.Prosite.Pattern.Prosite-class.html" >Prosite</a><br /> <a target="mainFrame" href="Bio.Prosite.Pattern.PrositeAlphabet-class.html" >PrositeAlphabet</a><br /> <a target="mainFrame" href="Bio.Prosite.Pattern.PrositeMatch-class.html" >PrositeMatch</a><br /> <a target="mainFrame" href="Bio.Prosite.Pattern.PrositeTerm-class.html" >PrositeTerm</a><br /> <h2 class="toc">Functions</h2> <div class="private"> <a target="mainFrame" href="Bio.Prosite.Pattern-module.html#_verify_test" >_verify_test</a><br /> </div> <a target="mainFrame" href="Bio.Prosite.Pattern-module.html#compile" >compile</a><br /> <a target="mainFrame" href="Bio.Prosite.Pattern-module.html#find_terms" >find_terms</a><br /> <a target="mainFrame" href="Bio.Prosite.Pattern-module.html#pattern_mapping" >pattern_mapping</a><br /> <a target="mainFrame" href="Bio.Prosite.Pattern-module.html#prosite_to_grouped_re" >prosite_to_grouped_re</a><br /> <a target="mainFrame" href="Bio.Prosite.Pattern-module.html#prosite_to_re" >prosite_to_re</a><br /> <a target="mainFrame" href="Bio.Prosite.Pattern-module.html#verify_pattern" >verify_pattern</a><br /> <h2 class="toc">Variables</h2> <div class="private"> <a target="mainFrame" href="Bio.Prosite.Pattern-module.html#_prosite_trans" >_prosite_trans</a><br /> </div> <a target="mainFrame" href="Bio.Prosite.Pattern-module.html#prosite_alphabet" >prosite_alphabet</a><br /> <a target="mainFrame" href="Bio.Prosite.Pattern-module.html#prosite_re" >prosite_re</a><br /> <a target="mainFrame" href="Bio.Prosite.Pattern-module.html#prosite_term_re" >prosite_term_re</a><br /><hr /> <span class="options">[<a href="javascript:void(0);" class="privatelink" onclick="toggle_private();">hide private</a>]</span> <script type="text/javascript"> <!-- // Private objects are initially displayed (because if // javascript is turned off then we want them to be // visible); but by default, we want to hide them. So hide // them unless we have a cookie that says to show them. checkCookie(); // --> </script> </body> </html>