<?xml version="1.0" encoding="ascii"?> <!DOCTYPE html PUBLIC "-//W3C//DTD XHTML 1.0 Transitional//EN" "DTD/xhtml1-transitional.dtd"> <html xmlns="http://www.w3.org/1999/xhtml" xml:lang="en" lang="en"> <head> <title>Alphabet</title> <link rel="stylesheet" href="epydoc.css" type="text/css" /> <script type="text/javascript" src="epydoc.js"></script> </head> <body bgcolor="white" text="black" link="blue" vlink="#204080" alink="#204080"> <h1 class="toc">Module Alphabet</h1> <hr /> <h2 class="toc">Classes</h2> <a target="mainFrame" href="Bio.Alphabet.Alphabet-class.html" >Alphabet</a><br /> <a target="mainFrame" href="Bio.Alphabet.AlphabetEncoder-class.html" >AlphabetEncoder</a><br /> <a target="mainFrame" href="Bio.Alphabet.DNAAlphabet-class.html" >DNAAlphabet</a><br /> <a target="mainFrame" href="Bio.Alphabet.Gapped-class.html" >Gapped</a><br /> <a target="mainFrame" href="Bio.Alphabet.HasStopCodon-class.html" >HasStopCodon</a><br /> <a target="mainFrame" href="Bio.Alphabet.NucleotideAlphabet-class.html" >NucleotideAlphabet</a><br /> <a target="mainFrame" href="Bio.Alphabet.ProteinAlphabet-class.html" >ProteinAlphabet</a><br /> <a target="mainFrame" href="Bio.Alphabet.RNAAlphabet-class.html" >RNAAlphabet</a><br /> <a target="mainFrame" href="Bio.Alphabet.SecondaryStructure-class.html" >SecondaryStructure</a><br /> <a target="mainFrame" href="Bio.Alphabet.SingleLetterAlphabet-class.html" >SingleLetterAlphabet</a><br /> <a target="mainFrame" href="Bio.Alphabet.ThreeLetterProtein-class.html" >ThreeLetterProtein</a><br /> <h2 class="toc">Variables</h2> <a target="mainFrame" href="Bio.Alphabet-module.html#generic_alphabet" >generic_alphabet</a><br /> <a target="mainFrame" href="Bio.Alphabet-module.html#generic_dna" >generic_dna</a><br /> <a target="mainFrame" href="Bio.Alphabet-module.html#generic_nucleotide" >generic_nucleotide</a><br /> <a target="mainFrame" href="Bio.Alphabet-module.html#generic_protein" >generic_protein</a><br /> <a target="mainFrame" href="Bio.Alphabet-module.html#generic_rna" >generic_rna</a><br /> <a target="mainFrame" href="Bio.Alphabet-module.html#single_letter_alphabet" >single_letter_alphabet</a><br /><hr /> <span class="options">[<a href="javascript:void(0);" class="privatelink" onclick="toggle_private();">hide private</a>]</span> <script type="text/javascript"> <!-- // Private objects are initially displayed (because if // javascript is turned off then we want them to be // visible); but by default, we want to hide them. So hide // them unless we have a cookie that says to show them. checkCookie(); // --> </script> </body> </html>