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<a href="Bio-module.html">Package Bio</a> ::
Package Compass
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<h1 class="epydoc">Package Compass</h1><p class="nomargin-top"><span class="codelink"><a href="Bio.Compass-pysrc.html">source code</a></span></p>
<p>Code to deal with COMPASS output, a program for profile/profile
comparison.</p>
<p>Compass is described in:</p>
<p>Sadreyev R, Grishin N. COMPASS: a tool for comparison of multiple
protein alignments with assessment of statistical significance. J Mol
Biol. 2003 Feb 7;326(1):317-36.</p>
<p>Tested with COMPASS 1.24.</p>
<p>Classes: Record One result of a compass file _Scanner Scan
compass results _Consumer Consume scanner events RecordParser Parse
one compass record Iterator Iterate through a number of compass
records</p>
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Hold information from one compass hit.
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Reads compass output and generate events
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Parses compass results into a Record object.
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Iterate through a file of compass results
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