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        <a href="Martel-module.html">Package&nbsp;Martel</a> ::
        <a href="Martel.test-module.html">Package&nbsp;test</a> ::
        Module&nbsp;test_attrs
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<h1 class="epydoc">Source Code for <a href="Martel.test.test_attrs-module.html">Module Martel.test.test_attrs</a></h1>
<pre class="py-src">
<a name="L1"></a><tt class="py-lineno">  1</tt>  <tt class="py-line"><tt class="py-comment"># Ensure that attributes really work</tt> </tt>
<a name="L2"></a><tt class="py-lineno">  2</tt>  <tt class="py-line"><tt class="py-comment"></tt> </tt>
<a name="L3"></a><tt class="py-lineno">  3</tt>  <tt class="py-line"><tt class="py-keyword">from</tt> <tt class="py-name">xml</tt><tt class="py-op">.</tt><tt class="py-name">sax</tt> <tt class="py-keyword">import</tt> <tt class="py-name">handler</tt> </tt>
<a name="L4"></a><tt class="py-lineno">  4</tt>  <tt class="py-line"><tt class="py-keyword">import</tt> <tt id="link-0" class="py-name" targets="Package Martel=Martel-module.html"><a title="Martel" class="py-name" href="#" onclick="return doclink('link-0', 'Martel', 'link-0');">Martel</a></tt> </tt>
<a name="L5"></a><tt class="py-lineno">  5</tt>  <tt class="py-line"><tt class="py-keyword">from</tt> <tt id="link-1" class="py-name"><a title="Martel" class="py-name" href="#" onclick="return doclink('link-1', 'Martel', 'link-0');">Martel</a></tt> <tt class="py-keyword">import</tt> <tt id="link-2" class="py-name" targets="Module Martel.RecordReader=Martel.RecordReader-module.html,Class Martel.RecordReader.RecordReader=Martel.RecordReader.RecordReader-class.html"><a title="Martel.RecordReader
Martel.RecordReader.RecordReader" class="py-name" href="#" onclick="return doclink('link-2', 'RecordReader', 'link-2');">RecordReader</a></tt> </tt>
<a name="L6"></a><tt class="py-lineno">  6</tt>  <tt class="py-line"> </tt>
<a name="GrabElements"></a><div id="GrabElements-def"><a name="L7"></a><tt class="py-lineno">  7</tt> <a class="py-toggle" href="#" id="GrabElements-toggle" onclick="return toggle('GrabElements');">-</a><tt class="py-line"><tt class="py-keyword">class</tt> <a class="py-def-name" href="Martel.test.test_attrs.GrabElements-class.html">GrabElements</a><tt class="py-op">(</tt><tt class="py-base-class">handler</tt><tt class="py-op">.</tt><tt class="py-base-class">ContentHandler</tt><tt class="py-op">,</tt> <tt class="py-base-class">handler</tt><tt class="py-op">.</tt><tt class="py-base-class">ErrorHandler</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="GrabElements-collapsed" style="display:none;" pad="+++" indent="++++"></div><div id="GrabElements-expanded"><a name="GrabElements.startDocument"></a><div id="GrabElements.startDocument-def"><a name="L8"></a><tt class="py-lineno">  8</tt> <a class="py-toggle" href="#" id="GrabElements.startDocument-toggle" onclick="return toggle('GrabElements.startDocument');">-</a><tt class="py-line">    <tt class="py-keyword">def</tt> <a class="py-def-name" href="Martel.test.test_attrs.GrabElements-class.html#startDocument">startDocument</a><tt class="py-op">(</tt><tt class="py-param">self</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="GrabElements.startDocument-collapsed" style="display:none;" pad="+++" indent="++++++++"></div><div id="GrabElements.startDocument-expanded"><a name="L9"></a><tt class="py-lineno">  9</tt>  <tt class="py-line">        <tt class="py-name">self</tt><tt class="py-op">.</tt><tt id="link-3" class="py-name" targets="Method Bio.Restriction.Restriction.RestrictionBatch.elements()=Bio.Restriction.Restriction.RestrictionBatch-class.html#elements"><a title="Bio.Restriction.Restriction.RestrictionBatch.elements" class="py-name" href="#" onclick="return doclink('link-3', 'elements', 'link-3');">elements</a></tt> <tt class="py-op">=</tt> <tt class="py-op">[</tt><tt class="py-op">]</tt> </tt>
</div><a name="GrabElements.startElement"></a><div id="GrabElements.startElement-def"><a name="L10"></a><tt class="py-lineno"> 10</tt> <a class="py-toggle" href="#" id="GrabElements.startElement-toggle" onclick="return toggle('GrabElements.startElement');">-</a><tt class="py-line">    <tt class="py-keyword">def</tt> <a class="py-def-name" href="Martel.test.test_attrs.GrabElements-class.html#startElement">startElement</a><tt class="py-op">(</tt><tt class="py-param">self</tt><tt class="py-op">,</tt> <tt class="py-param">name</tt><tt class="py-op">,</tt> <tt class="py-param">attrs</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="GrabElements.startElement-collapsed" style="display:none;" pad="+++" indent="++++++++"></div><div id="GrabElements.startElement-expanded"><a name="L11"></a><tt class="py-lineno"> 11</tt>  <tt class="py-line">        <tt class="py-name">self</tt><tt class="py-op">.</tt><tt id="link-4" class="py-name"><a title="Bio.Restriction.Restriction.RestrictionBatch.elements" class="py-name" href="#" onclick="return doclink('link-4', 'elements', 'link-3');">elements</a></tt><tt class="py-op">.</tt><tt id="link-5" class="py-name" targets="Method Bio.Crystal.Chain.append()=Bio.Crystal.Chain-class.html#append,Method Bio.EUtils.POM.ElementNode.append()=Bio.EUtils.POM.ElementNode-class.html#append,Method Bio.EUtils.sourcegen.SourceFile.append()=Bio.EUtils.sourcegen.SourceFile-class.html#append,Method Bio.SCOP.Raf.SeqMap.append()=Bio.SCOP.Raf.SeqMap-class.html#append,Method Bio.Seq.MutableSeq.append()=Bio.Seq.MutableSeq-class.html#append,Method Bio.Wise.psw.Alignment.append()=Bio.Wise.psw.Alignment-class.html#append,Method Bio.Wise.psw.AlignmentColumn.append()=Bio.Wise.psw.AlignmentColumn-class.html#append,Method Martel.msre_parse.SubPattern.append()=Martel.msre_parse.SubPattern-class.html#append"><a title="Bio.Crystal.Chain.append
Bio.EUtils.POM.ElementNode.append
Bio.EUtils.sourcegen.SourceFile.append
Bio.SCOP.Raf.SeqMap.append
Bio.Seq.MutableSeq.append
Bio.Wise.psw.Alignment.append
Bio.Wise.psw.AlignmentColumn.append
Martel.msre_parse.SubPattern.append" class="py-name" href="#" onclick="return doclink('link-5', 'append', 'link-5');">append</a></tt><tt class="py-op">(</tt> <tt class="py-op">(</tt><tt id="link-6" class="py-name" targets="Variable Bio.Encodings.IUPACEncoding.name=Bio.Encodings.IUPACEncoding-module.html#name"><a title="Bio.Encodings.IUPACEncoding.name" class="py-name" href="#" onclick="return doclink('link-6', 'name', 'link-6');">name</a></tt><tt class="py-op">,</tt> <tt id="link-7" class="py-name" targets="Variable Martel.Time.attrs=Martel.Time-module.html#attrs"><a title="Martel.Time.attrs" class="py-name" href="#" onclick="return doclink('link-7', 'attrs', 'link-7');">attrs</a></tt><tt class="py-op">)</tt> <tt class="py-op">)</tt> </tt>
</div></div><a name="L12"></a><tt class="py-lineno"> 12</tt>  <tt class="py-line"> </tt>
<a name="L13"></a><tt class="py-lineno"> 13</tt>  <tt class="py-line"><tt class="py-comment">##def fixup_dict(d):</tt> </tt>
<a name="L14"></a><tt class="py-lineno"> 14</tt>  <tt class="py-line"><tt class="py-comment"></tt><tt class="py-comment">##    return d</tt> </tt>
<a name="L15"></a><tt class="py-lineno"> 15</tt>  <tt class="py-line"><tt class="py-comment"></tt><tt class="py-comment">##    dict = {}</tt> </tt>
<a name="L16"></a><tt class="py-lineno"> 16</tt>  <tt class="py-line"><tt class="py-comment"></tt><tt class="py-comment">##    for k, v in d.items():</tt> </tt>
<a name="L17"></a><tt class="py-lineno"> 17</tt>  <tt class="py-line"><tt class="py-comment"></tt><tt class="py-comment">##        dict[k] = v</tt> </tt>
<a name="L18"></a><tt class="py-lineno"> 18</tt>  <tt class="py-line"><tt class="py-comment"></tt><tt class="py-comment">##    return dict</tt> </tt>
<a name="L19"></a><tt class="py-lineno"> 19</tt>  <tt class="py-line"><tt class="py-comment"></tt> </tt>
<a name="get_element"></a><div id="get_element-def"><a name="L20"></a><tt class="py-lineno"> 20</tt> <a class="py-toggle" href="#" id="get_element-toggle" onclick="return toggle('get_element');">-</a><tt class="py-line"><tt class="py-keyword">def</tt> <a class="py-def-name" href="Martel.test.test_attrs-module.html#get_element">get_element</a><tt class="py-op">(</tt><tt class="py-param">format</tt><tt class="py-op">,</tt> <tt class="py-param">text</tt> <tt class="py-op">=</tt> <tt class="py-string">"X"</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="get_element-collapsed" style="display:none;" pad="+++" indent="++++"></div><div id="get_element-expanded"><a name="L21"></a><tt class="py-lineno"> 21</tt>  <tt class="py-line">    <tt class="py-name">parser</tt> <tt class="py-op">=</tt> <tt id="link-8" class="py-name" targets="Method Bio.Restriction.Restriction.RestrictionBatch.format()=Bio.Restriction.Restriction.RestrictionBatch-class.html#format,Variable Bio.expressions.blast.ncbiblast.format=Bio.expressions.blast.ncbiblast-module.html#format,Variable Bio.expressions.blast.wublast.format=Bio.expressions.blast.wublast-module.html#format,Variable Bio.expressions.blocks.format=Bio.expressions.blocks-module.html#format,Variable Bio.expressions.embl.embl65.format=Bio.expressions.embl.embl65-module.html#format,Variable Bio.expressions.fasta.format=Bio.expressions.fasta-module.html#format,Variable Bio.expressions.genbank.format=Bio.expressions.genbank-module.html#format,Variable Bio.expressions.hmmpfam.format=Bio.expressions.hmmpfam-module.html#format,Variable Bio.expressions.swissprot.ipi.format=Bio.expressions.swissprot.ipi-module.html#format,Variable Bio.expressions.swissprot.speclist.format=Bio.expressions.swissprot.speclist-module.html#format,Variable Bio.expressions.swissprot.sprot38.format=Bio.expressions.swissprot.sprot38-module.html#format,Variable Bio.expressions.swissprot.sprot40.format=Bio.expressions.swissprot.sprot40-module.html#format,Variable Bio.expressions.transfac.format=Bio.expressions.transfac-module.html#format,Variable Martel.test.test_swissprot38.format=Martel.test.test_swissprot38-module.html#format,Variable Martel.test.testformats.swissprot38.format=Martel.test.testformats.swissprot38-module.html#format"><a title="Bio.Restriction.Restriction.RestrictionBatch.format
Bio.expressions.blast.ncbiblast.format
Bio.expressions.blast.wublast.format
Bio.expressions.blocks.format
Bio.expressions.embl.embl65.format
Bio.expressions.fasta.format
Bio.expressions.genbank.format
Bio.expressions.hmmpfam.format
Bio.expressions.swissprot.ipi.format
Bio.expressions.swissprot.speclist.format
Bio.expressions.swissprot.sprot38.format
Bio.expressions.swissprot.sprot40.format
Bio.expressions.transfac.format
Martel.test.test_swissprot38.format
Martel.test.testformats.swissprot38.format" class="py-name" href="#" onclick="return doclink('link-8', 'format', 'link-8');">format</a></tt><tt class="py-op">.</tt><tt id="link-9" class="py-name" targets="Method Bio.config.FormatRegistry.FormatObject.make_parser()=Bio.config.FormatRegistry.FormatObject-class.html#make_parser,Method Bio.config._support.make_cached_expression.make_parser()=Bio.config._support.make_cached_expression-class.html#make_parser,Method Martel.Expression.Expression.make_parser()=Martel.Expression.Expression-class.html#make_parser,Method Martel.Expression.HeaderFooter.make_parser()=Martel.Expression.HeaderFooter-class.html#make_parser,Method Martel.Expression.ParseRecords.make_parser()=Martel.Expression.ParseRecords-class.html#make_parser"><a title="Bio.config.FormatRegistry.FormatObject.make_parser
Bio.config._support.make_cached_expression.make_parser
Martel.Expression.Expression.make_parser
Martel.Expression.HeaderFooter.make_parser
Martel.Expression.ParseRecords.make_parser" class="py-name" href="#" onclick="return doclink('link-9', 'make_parser', 'link-9');">make_parser</a></tt><tt class="py-op">(</tt><tt class="py-op">)</tt> </tt>
<a name="L22"></a><tt class="py-lineno"> 22</tt>  <tt class="py-line">    <tt class="py-name">grab</tt> <tt class="py-op">=</tt> <tt id="link-10" class="py-name" targets="Class Martel.test.test_attrs.GrabElements=Martel.test.test_attrs.GrabElements-class.html"><a title="Martel.test.test_attrs.GrabElements" class="py-name" href="#" onclick="return doclink('link-10', 'GrabElements', 'link-10');">GrabElements</a></tt><tt class="py-op">(</tt><tt class="py-op">)</tt> </tt>
<a name="L23"></a><tt class="py-lineno"> 23</tt>  <tt class="py-line">    <tt class="py-name">parser</tt><tt class="py-op">.</tt><tt class="py-name">setContentHandler</tt><tt class="py-op">(</tt><tt class="py-name">grab</tt><tt class="py-op">)</tt> </tt>
<a name="L24"></a><tt class="py-lineno"> 24</tt>  <tt class="py-line">    <tt class="py-name">parser</tt><tt class="py-op">.</tt><tt id="link-11" class="py-name" targets="Method Martel.Parser.HeaderFooterParser.parseString()=Martel.Parser.HeaderFooterParser-class.html#parseString,Method Martel.Parser.Parser.parseString()=Martel.Parser.Parser-class.html#parseString,Method Martel.Parser.RecordParser.parseString()=Martel.Parser.RecordParser-class.html#parseString"><a title="Martel.Parser.HeaderFooterParser.parseString
Martel.Parser.Parser.parseString
Martel.Parser.RecordParser.parseString" class="py-name" href="#" onclick="return doclink('link-11', 'parseString', 'link-11');">parseString</a></tt><tt class="py-op">(</tt><tt id="link-12" class="py-name" targets="Method Bio.EUtils.POM.ElementNode.text()=Bio.EUtils.POM.ElementNode-class.html#text,Method Bio.Prosite.Prodoc._RecordConsumer.text()=Bio.Prosite.Prodoc._RecordConsumer-class.html#text,Variable Martel.test.test_Iterator.text=Martel.test.test_Iterator-module.html#text,Variable Martel.test.test_ParseRecords.text=Martel.test.test_ParseRecords-module.html#text"><a title="Bio.EUtils.POM.ElementNode.text
Bio.Prosite.Prodoc._RecordConsumer.text
Martel.test.test_Iterator.text
Martel.test.test_ParseRecords.text" class="py-name" href="#" onclick="return doclink('link-12', 'text', 'link-12');">text</a></tt><tt class="py-op">)</tt> </tt>
<a name="L25"></a><tt class="py-lineno"> 25</tt>  <tt class="py-line">    <tt class="py-keyword">assert</tt> <tt class="py-name">len</tt><tt class="py-op">(</tt><tt class="py-name">grab</tt><tt class="py-op">.</tt><tt id="link-13" class="py-name"><a title="Bio.Restriction.Restriction.RestrictionBatch.elements" class="py-name" href="#" onclick="return doclink('link-13', 'elements', 'link-3');">elements</a></tt><tt class="py-op">)</tt> <tt class="py-op">==</tt> <tt class="py-number">1</tt><tt class="py-op">,</tt> <tt class="py-name">len</tt><tt class="py-op">(</tt><tt class="py-name">grab</tt><tt class="py-op">.</tt><tt id="link-14" class="py-name"><a title="Bio.Restriction.Restriction.RestrictionBatch.elements" class="py-name" href="#" onclick="return doclink('link-14', 'elements', 'link-3');">elements</a></tt><tt class="py-op">)</tt> </tt>
<a name="L26"></a><tt class="py-lineno"> 26</tt>  <tt class="py-line">    <tt class="py-keyword">return</tt> <tt class="py-name">grab</tt><tt class="py-op">.</tt><tt id="link-15" class="py-name"><a title="Bio.Restriction.Restriction.RestrictionBatch.elements" class="py-name" href="#" onclick="return doclink('link-15', 'elements', 'link-3');">elements</a></tt><tt class="py-op">[</tt><tt class="py-number">0</tt><tt class="py-op">]</tt> </tt>
</div><a name="L27"></a><tt class="py-lineno"> 27</tt>  <tt class="py-line"> </tt>
<a name="cmp_dicts"></a><div id="cmp_dicts-def"><a name="L28"></a><tt class="py-lineno"> 28</tt> <a class="py-toggle" href="#" id="cmp_dicts-toggle" onclick="return toggle('cmp_dicts');">-</a><tt class="py-line"><tt class="py-keyword">def</tt> <a class="py-def-name" href="Martel.test.test_attrs-module.html#cmp_dicts">cmp_dicts</a><tt class="py-op">(</tt><tt class="py-param">d1</tt><tt class="py-op">,</tt> <tt class="py-param">d2</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="cmp_dicts-collapsed" style="display:none;" pad="+++" indent="++++"></div><div id="cmp_dicts-expanded"><a name="L29"></a><tt class="py-lineno"> 29</tt>  <tt class="py-line">    <tt class="py-name">items1</tt> <tt class="py-op">=</tt> <tt class="py-name">d1</tt><tt class="py-op">.</tt><tt id="link-16" class="py-name" targets="Method Bio.Crystal.Crystal.items()=Bio.Crystal.Crystal-class.html#items,Method Bio.EUtils.MultiDict._BaseMultiDict.items()=Bio.EUtils.MultiDict._BaseMultiDict-class.html#items,Variable Bio.Entrez.SerialSet.items=Bio.Entrez.SerialSet-module.html#items,Method Bio.GenBank.NCBIDictionary.items()=Bio.GenBank.NCBIDictionary-class.html#items,Method Bio.Mindy.BaseDB.DictLookup.items()=Bio.Mindy.BaseDB.DictLookup-class.html#items,Method Bio.Prosite.ExPASyDictionary.items()=Bio.Prosite.ExPASyDictionary-class.html#items,Method Bio.Prosite.Prodoc.ExPASyDictionary.items()=Bio.Prosite.Prodoc.ExPASyDictionary-class.html#items,Method Bio.PubMed.Dictionary.items()=Bio.PubMed.Dictionary-class.html#items,Method Bio.SwissProt.SProt.ExPASyDictionary.items()=Bio.SwissProt.SProt.ExPASyDictionary-class.html#items,Method Bio.config.Registry.Registry.items()=Bio.config.Registry.Registry-class.html#items,Function Bio.listfns.items()=Bio.listfns-module.html#items,Method BioSQL.BioSeqDatabase.BioSeqDatabase.items()=BioSQL.BioSeqDatabase.BioSeqDatabase-class.html#items,Method BioSQL.BioSeqDatabase.DBServer.items()=BioSQL.BioSeqDatabase.DBServer-class.html#items,Method Martel.Parser.MartelAttributeList.items()=Martel.Parser.MartelAttributeList-class.html#items"><a title="Bio.Crystal.Crystal.items
Bio.EUtils.MultiDict._BaseMultiDict.items
Bio.Entrez.SerialSet.items
Bio.GenBank.NCBIDictionary.items
Bio.Mindy.BaseDB.DictLookup.items
Bio.Prosite.ExPASyDictionary.items
Bio.Prosite.Prodoc.ExPASyDictionary.items
Bio.PubMed.Dictionary.items
Bio.SwissProt.SProt.ExPASyDictionary.items
Bio.config.Registry.Registry.items
Bio.listfns.items
BioSQL.BioSeqDatabase.BioSeqDatabase.items
BioSQL.BioSeqDatabase.DBServer.items
Martel.Parser.MartelAttributeList.items" class="py-name" href="#" onclick="return doclink('link-16', 'items', 'link-16');">items</a></tt><tt class="py-op">(</tt><tt class="py-op">)</tt> </tt>
<a name="L30"></a><tt class="py-lineno"> 30</tt>  <tt class="py-line">    <tt class="py-name">items1</tt><tt class="py-op">.</tt><tt id="link-17" class="py-name" targets="Method Bio.PDB.Residue.DisorderedResidue.sort()=Bio.PDB.Residue.DisorderedResidue-class.html#sort,Method Bio.PDB.Residue.Residue.sort()=Bio.PDB.Residue.Residue-class.html#sort,Method Bio.Sequencing.Ace.ACEFileRecord.sort()=Bio.Sequencing.Ace.ACEFileRecord-class.html#sort"><a title="Bio.PDB.Residue.DisorderedResidue.sort
Bio.PDB.Residue.Residue.sort
Bio.Sequencing.Ace.ACEFileRecord.sort" class="py-name" href="#" onclick="return doclink('link-17', 'sort', 'link-17');">sort</a></tt><tt class="py-op">(</tt><tt class="py-op">)</tt> </tt>
<a name="L31"></a><tt class="py-lineno"> 31</tt>  <tt class="py-line"> </tt>
<a name="L32"></a><tt class="py-lineno"> 32</tt>  <tt class="py-line">    <tt class="py-name">items2</tt> <tt class="py-op">=</tt> <tt class="py-name">d2</tt><tt class="py-op">.</tt><tt id="link-18" class="py-name"><a title="Bio.Crystal.Crystal.items
Bio.EUtils.MultiDict._BaseMultiDict.items
Bio.Entrez.SerialSet.items
Bio.GenBank.NCBIDictionary.items
Bio.Mindy.BaseDB.DictLookup.items
Bio.Prosite.ExPASyDictionary.items
Bio.Prosite.Prodoc.ExPASyDictionary.items
Bio.PubMed.Dictionary.items
Bio.SwissProt.SProt.ExPASyDictionary.items
Bio.config.Registry.Registry.items
Bio.listfns.items
BioSQL.BioSeqDatabase.BioSeqDatabase.items
BioSQL.BioSeqDatabase.DBServer.items
Martel.Parser.MartelAttributeList.items" class="py-name" href="#" onclick="return doclink('link-18', 'items', 'link-16');">items</a></tt><tt class="py-op">(</tt><tt class="py-op">)</tt> </tt>
<a name="L33"></a><tt class="py-lineno"> 33</tt>  <tt class="py-line">    <tt class="py-name">items2</tt><tt class="py-op">.</tt><tt id="link-19" class="py-name"><a title="Bio.PDB.Residue.DisorderedResidue.sort
Bio.PDB.Residue.Residue.sort
Bio.Sequencing.Ace.ACEFileRecord.sort" class="py-name" href="#" onclick="return doclink('link-19', 'sort', 'link-17');">sort</a></tt><tt class="py-op">(</tt><tt class="py-op">)</tt> </tt>
<a name="L34"></a><tt class="py-lineno"> 34</tt>  <tt class="py-line"> </tt>
<a name="L35"></a><tt class="py-lineno"> 35</tt>  <tt class="py-line">    <tt class="py-keyword">return</tt> <tt class="py-name">cmp</tt><tt class="py-op">(</tt><tt class="py-name">items1</tt><tt class="py-op">,</tt> <tt class="py-name">items2</tt><tt class="py-op">)</tt> </tt>
</div><a name="L36"></a><tt class="py-lineno"> 36</tt>  <tt class="py-line"> </tt>
<a name="check_dicts"></a><div id="check_dicts-def"><a name="L37"></a><tt class="py-lineno"> 37</tt> <a class="py-toggle" href="#" id="check_dicts-toggle" onclick="return toggle('check_dicts');">-</a><tt class="py-line"><tt class="py-keyword">def</tt> <a class="py-def-name" href="Martel.test.test_attrs-module.html#check_dicts">check_dicts</a><tt class="py-op">(</tt><tt class="py-param">d1</tt><tt class="py-op">,</tt> <tt class="py-param">d2</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="check_dicts-collapsed" style="display:none;" pad="+++" indent="++++"></div><div id="check_dicts-expanded"><a name="L38"></a><tt class="py-lineno"> 38</tt>  <tt class="py-line">    <tt class="py-keyword">if</tt> <tt id="link-20" class="py-name" targets="Function Martel.test.test_attrs.cmp_dicts()=Martel.test.test_attrs-module.html#cmp_dicts"><a title="Martel.test.test_attrs.cmp_dicts" class="py-name" href="#" onclick="return doclink('link-20', 'cmp_dicts', 'link-20');">cmp_dicts</a></tt><tt class="py-op">(</tt><tt class="py-name">d1</tt><tt class="py-op">,</tt> <tt class="py-name">d2</tt><tt class="py-op">)</tt> <tt class="py-op">!=</tt> <tt class="py-number">0</tt><tt class="py-op">:</tt> </tt>
<a name="L39"></a><tt class="py-lineno"> 39</tt>  <tt class="py-line">        <tt class="py-keyword">raise</tt> <tt class="py-name">AssertionError</tt><tt class="py-op">(</tt><tt class="py-string">"No match: %s, %s"</tt> <tt class="py-op">%</tt> <tt class="py-op">(</tt><tt class="py-name">d1</tt><tt class="py-op">,</tt> <tt class="py-name">d2</tt><tt class="py-op">)</tt><tt class="py-op">)</tt> </tt>
</div><a name="L40"></a><tt class="py-lineno"> 40</tt>  <tt class="py-line"> </tt>
<a name="check_element"></a><div id="check_element-def"><a name="L41"></a><tt class="py-lineno"> 41</tt> <a class="py-toggle" href="#" id="check_element-toggle" onclick="return toggle('check_element');">-</a><tt class="py-line"><tt class="py-keyword">def</tt> <a class="py-def-name" href="Martel.test.test_attrs-module.html#check_element">check_element</a><tt class="py-op">(</tt> <tt class="py-op">(</tt><tt class="py-param">name1</tt><tt class="py-op">,</tt> <tt class="py-param">dict1</tt><tt class="py-op">)</tt><tt class="py-op">,</tt> <tt class="py-op">(</tt><tt class="py-param">name2</tt><tt class="py-op">,</tt> <tt class="py-param">dict2</tt><tt class="py-op">)</tt> <tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="check_element-collapsed" style="display:none;" pad="+++" indent="++++"></div><div id="check_element-expanded"><a name="L42"></a><tt class="py-lineno"> 42</tt>  <tt class="py-line">    <tt class="py-keyword">assert</tt> <tt class="py-name">name1</tt> <tt class="py-op">==</tt> <tt class="py-name">name2</tt><tt class="py-op">,</tt> <tt class="py-op">(</tt><tt class="py-name">name1</tt><tt class="py-op">,</tt> <tt class="py-name">name2</tt><tt class="py-op">)</tt> </tt>
<a name="L43"></a><tt class="py-lineno"> 43</tt>  <tt class="py-line">    <tt id="link-21" class="py-name" targets="Function Martel.test.test_attrs.check_dicts()=Martel.test.test_attrs-module.html#check_dicts"><a title="Martel.test.test_attrs.check_dicts" class="py-name" href="#" onclick="return doclink('link-21', 'check_dicts', 'link-21');">check_dicts</a></tt><tt class="py-op">(</tt><tt class="py-name">dict1</tt><tt class="py-op">,</tt> <tt class="py-name">dict2</tt><tt class="py-op">)</tt> </tt>
</div><a name="L44"></a><tt class="py-lineno"> 44</tt>  <tt class="py-line"> </tt>
<a name="L45"></a><tt class="py-lineno"> 45</tt>  <tt class="py-line"> </tt>
<a name="test_none"></a><div id="test_none-def"><a name="L46"></a><tt class="py-lineno"> 46</tt> <a class="py-toggle" href="#" id="test_none-toggle" onclick="return toggle('test_none');">-</a><tt class="py-line"><tt class="py-keyword">def</tt> <a class="py-def-name" href="Martel.test.test_attrs-module.html#test_none">test_none</a><tt class="py-op">(</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="test_none-collapsed" style="display:none;" pad="+++" indent="++++"></div><div id="test_none-expanded"><a name="L47"></a><tt class="py-lineno"> 47</tt>  <tt class="py-line">    <tt class="py-name">ele</tt> <tt class="py-op">=</tt> <tt id="link-22" class="py-name" targets="Method Bio.EUtils.POM.ElementNode.get_element()=Bio.EUtils.POM.ElementNode-class.html#get_element,Function Martel.test.test_attrs.get_element()=Martel.test.test_attrs-module.html#get_element"><a title="Bio.EUtils.POM.ElementNode.get_element
Martel.test.test_attrs.get_element" class="py-name" href="#" onclick="return doclink('link-22', 'get_element', 'link-22');">get_element</a></tt><tt class="py-op">(</tt><tt id="link-23" class="py-name"><a title="Martel" class="py-name" href="#" onclick="return doclink('link-23', 'Martel', 'link-0');">Martel</a></tt><tt class="py-op">.</tt><tt id="link-24" class="py-name" targets="Class Martel.Expression.Group=Martel.Expression.Group-class.html,Function Martel.Group()=Martel-module.html#Group"><a title="Martel.Expression.Group
Martel.Group" class="py-name" href="#" onclick="return doclink('link-24', 'Group', 'link-24');">Group</a></tt><tt class="py-op">(</tt><tt class="py-string">"spam"</tt><tt class="py-op">,</tt> <tt id="link-25" class="py-name"><a title="Martel" class="py-name" href="#" onclick="return doclink('link-25', 'Martel', 'link-0');">Martel</a></tt><tt class="py-op">.</tt><tt id="link-26" class="py-name" targets="Class Martel.Expression.Str=Martel.Expression.Str-class.html,Function Martel.Str()=Martel-module.html#Str"><a title="Martel.Expression.Str
Martel.Str" class="py-name" href="#" onclick="return doclink('link-26', 'Str', 'link-26');">Str</a></tt><tt class="py-op">(</tt><tt class="py-string">"X"</tt><tt class="py-op">)</tt><tt class="py-op">)</tt><tt class="py-op">)</tt> </tt>
<a name="L48"></a><tt class="py-lineno"> 48</tt>  <tt class="py-line">    <tt id="link-27" class="py-name" targets="Function Martel.test.test_attrs.check_element()=Martel.test.test_attrs-module.html#check_element"><a title="Martel.test.test_attrs.check_element" class="py-name" href="#" onclick="return doclink('link-27', 'check_element', 'link-27');">check_element</a></tt><tt class="py-op">(</tt><tt class="py-name">ele</tt><tt class="py-op">,</tt> <tt class="py-op">(</tt><tt class="py-string">"spam"</tt><tt class="py-op">,</tt> <tt class="py-op">{</tt><tt class="py-op">}</tt><tt class="py-op">)</tt><tt class="py-op">)</tt> </tt>
<a name="L49"></a><tt class="py-lineno"> 49</tt>  <tt class="py-line"> </tt>
<a name="L50"></a><tt class="py-lineno"> 50</tt>  <tt class="py-line">    <tt class="py-name">ele</tt> <tt class="py-op">=</tt> <tt id="link-28" class="py-name"><a title="Bio.EUtils.POM.ElementNode.get_element
Martel.test.test_attrs.get_element" class="py-name" href="#" onclick="return doclink('link-28', 'get_element', 'link-22');">get_element</a></tt><tt class="py-op">(</tt><tt id="link-29" class="py-name"><a title="Martel" class="py-name" href="#" onclick="return doclink('link-29', 'Martel', 'link-0');">Martel</a></tt><tt class="py-op">.</tt><tt id="link-30" class="py-name"><a title="Martel.Expression.Group
Martel.Group" class="py-name" href="#" onclick="return doclink('link-30', 'Group', 'link-24');">Group</a></tt><tt class="py-op">(</tt><tt class="py-string">"spam"</tt><tt class="py-op">,</tt> <tt id="link-31" class="py-name"><a title="Martel" class="py-name" href="#" onclick="return doclink('link-31', 'Martel', 'link-0');">Martel</a></tt><tt class="py-op">.</tt><tt id="link-32" class="py-name"><a title="Martel.Expression.Str
Martel.Str" class="py-name" href="#" onclick="return doclink('link-32', 'Str', 'link-26');">Str</a></tt><tt class="py-op">(</tt><tt class="py-string">"X"</tt><tt class="py-op">)</tt><tt class="py-op">,</tt> <tt class="py-op">{</tt><tt class="py-op">}</tt><tt class="py-op">)</tt><tt class="py-op">)</tt> </tt>
<a name="L51"></a><tt class="py-lineno"> 51</tt>  <tt class="py-line">    <tt id="link-33" class="py-name"><a title="Martel.test.test_attrs.check_element" class="py-name" href="#" onclick="return doclink('link-33', 'check_element', 'link-27');">check_element</a></tt><tt class="py-op">(</tt><tt class="py-name">ele</tt><tt class="py-op">,</tt> <tt class="py-op">(</tt><tt class="py-string">"spam"</tt><tt class="py-op">,</tt> <tt class="py-op">{</tt><tt class="py-op">}</tt><tt class="py-op">)</tt><tt class="py-op">)</tt> </tt>
</div><a name="L52"></a><tt class="py-lineno"> 52</tt>  <tt class="py-line"> </tt>
<a name="test_single"></a><div id="test_single-def"><a name="L53"></a><tt class="py-lineno"> 53</tt> <a class="py-toggle" href="#" id="test_single-toggle" onclick="return toggle('test_single');">-</a><tt class="py-line"><tt class="py-keyword">def</tt> <a class="py-def-name" href="Martel.test.test_attrs-module.html#test_single">test_single</a><tt class="py-op">(</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="test_single-collapsed" style="display:none;" pad="+++" indent="++++"></div><div id="test_single-expanded"><a name="L54"></a><tt class="py-lineno"> 54</tt>  <tt class="py-line">    <tt class="py-name">ele</tt> <tt class="py-op">=</tt> <tt id="link-34" class="py-name"><a title="Bio.EUtils.POM.ElementNode.get_element
Martel.test.test_attrs.get_element" class="py-name" href="#" onclick="return doclink('link-34', 'get_element', 'link-22');">get_element</a></tt><tt class="py-op">(</tt> </tt>
<a name="L55"></a><tt class="py-lineno"> 55</tt>  <tt class="py-line">        <tt id="link-35" class="py-name"><a title="Martel" class="py-name" href="#" onclick="return doclink('link-35', 'Martel', 'link-0');">Martel</a></tt><tt class="py-op">.</tt><tt id="link-36" class="py-name"><a title="Martel.Expression.Group
Martel.Group" class="py-name" href="#" onclick="return doclink('link-36', 'Group', 'link-24');">Group</a></tt><tt class="py-op">(</tt><tt class="py-string">"spam"</tt><tt class="py-op">,</tt> <tt id="link-37" class="py-name"><a title="Martel" class="py-name" href="#" onclick="return doclink('link-37', 'Martel', 'link-0');">Martel</a></tt><tt class="py-op">.</tt><tt id="link-38" class="py-name"><a title="Martel.Expression.Str
Martel.Str" class="py-name" href="#" onclick="return doclink('link-38', 'Str', 'link-26');">Str</a></tt><tt class="py-op">(</tt><tt class="py-string">"X"</tt><tt class="py-op">)</tt><tt class="py-op">,</tt> <tt class="py-op">{</tt><tt class="py-string">"format"</tt><tt class="py-op">:</tt> <tt class="py-string">"swissprot"</tt><tt class="py-op">}</tt><tt class="py-op">)</tt><tt class="py-op">)</tt> </tt>
<a name="L56"></a><tt class="py-lineno"> 56</tt>  <tt class="py-line">    <tt id="link-39" class="py-name"><a title="Martel.test.test_attrs.check_element" class="py-name" href="#" onclick="return doclink('link-39', 'check_element', 'link-27');">check_element</a></tt><tt class="py-op">(</tt><tt class="py-name">ele</tt><tt class="py-op">,</tt> <tt class="py-op">(</tt><tt class="py-string">"spam"</tt><tt class="py-op">,</tt> <tt class="py-op">{</tt><tt class="py-string">"format"</tt><tt class="py-op">:</tt> <tt class="py-string">"swissprot"</tt><tt class="py-op">}</tt><tt class="py-op">)</tt><tt class="py-op">)</tt> </tt>
</div><a name="L57"></a><tt class="py-lineno"> 57</tt>  <tt class="py-line"> </tt>
<a name="test_multi"></a><div id="test_multi-def"><a name="L58"></a><tt class="py-lineno"> 58</tt> <a class="py-toggle" href="#" id="test_multi-toggle" onclick="return toggle('test_multi');">-</a><tt class="py-line"><tt class="py-keyword">def</tt> <a class="py-def-name" href="Martel.test.test_attrs-module.html#test_multi">test_multi</a><tt class="py-op">(</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="test_multi-collapsed" style="display:none;" pad="+++" indent="++++"></div><div id="test_multi-expanded"><a name="L59"></a><tt class="py-lineno"> 59</tt>  <tt class="py-line">    <tt class="py-name">ele</tt> <tt class="py-op">=</tt> <tt id="link-40" class="py-name"><a title="Bio.EUtils.POM.ElementNode.get_element
Martel.test.test_attrs.get_element" class="py-name" href="#" onclick="return doclink('link-40', 'get_element', 'link-22');">get_element</a></tt><tt class="py-op">(</tt><tt id="link-41" class="py-name"><a title="Martel" class="py-name" href="#" onclick="return doclink('link-41', 'Martel', 'link-0');">Martel</a></tt><tt class="py-op">.</tt><tt id="link-42" class="py-name" targets="Function Martel.Re()=Martel-module.html#Re"><a title="Martel.Re" class="py-name" href="#" onclick="return doclink('link-42', 'Re', 'link-42');">Re</a></tt><tt class="py-op">(</tt><tt class="py-string">"(?P&lt;qwe?def=%7Edalke&amp;a=1&amp;b=2&amp;cc=33&gt;X)"</tt><tt class="py-op">)</tt><tt class="py-op">)</tt> </tt>
<a name="L60"></a><tt class="py-lineno"> 60</tt>  <tt class="py-line">    <tt id="link-43" class="py-name"><a title="Martel.test.test_attrs.check_element" class="py-name" href="#" onclick="return doclink('link-43', 'check_element', 'link-27');">check_element</a></tt><tt class="py-op">(</tt><tt class="py-name">ele</tt><tt class="py-op">,</tt> <tt class="py-op">(</tt><tt class="py-string">"qwe"</tt><tt class="py-op">,</tt> <tt class="py-op">{</tt><tt class="py-string">"def"</tt><tt class="py-op">:</tt> <tt class="py-string">"~dalke"</tt><tt class="py-op">,</tt> </tt>
<a name="L61"></a><tt class="py-lineno"> 61</tt>  <tt class="py-line">                                <tt class="py-string">"a"</tt><tt class="py-op">:</tt> <tt class="py-string">"1"</tt><tt class="py-op">,</tt> </tt>
<a name="L62"></a><tt class="py-lineno"> 62</tt>  <tt class="py-line">                                <tt class="py-string">"b"</tt><tt class="py-op">:</tt> <tt class="py-string">"2"</tt><tt class="py-op">,</tt> </tt>
<a name="L63"></a><tt class="py-lineno"> 63</tt>  <tt class="py-line">                                <tt class="py-string">"cc"</tt><tt class="py-op">:</tt> <tt class="py-string">"33"</tt><tt class="py-op">}</tt><tt class="py-op">)</tt><tt class="py-op">)</tt> </tt>
</div><a name="test_escape"></a><div id="test_escape-def"><a name="L64"></a><tt class="py-lineno"> 64</tt> <a class="py-toggle" href="#" id="test_escape-toggle" onclick="return toggle('test_escape');">-</a><tt class="py-line"><tt class="py-keyword">def</tt> <a class="py-def-name" href="Martel.test.test_attrs-module.html#test_escape">test_escape</a><tt class="py-op">(</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="test_escape-collapsed" style="display:none;" pad="+++" indent="++++"></div><div id="test_escape-expanded"><a name="L65"></a><tt class="py-lineno"> 65</tt>  <tt class="py-line">    <tt id="link-44" class="py-name"><a title="Bio.Encodings.IUPACEncoding.name" class="py-name" href="#" onclick="return doclink('link-44', 'name', 'link-6');">name</a></tt><tt class="py-op">,</tt> <tt id="link-45" class="py-name"><a title="Martel.Time.attrs" class="py-name" href="#" onclick="return doclink('link-45', 'attrs', 'link-7');">attrs</a></tt> <tt class="py-op">=</tt> <tt id="link-46" class="py-name"><a title="Bio.EUtils.POM.ElementNode.get_element
Martel.test.test_attrs.get_element" class="py-name" href="#" onclick="return doclink('link-46', 'get_element', 'link-22');">get_element</a></tt><tt class="py-op">(</tt><tt id="link-47" class="py-name"><a title="Martel" class="py-name" href="#" onclick="return doclink('link-47', 'Martel', 'link-0');">Martel</a></tt><tt class="py-op">.</tt><tt id="link-48" class="py-name"><a title="Martel.Re" class="py-name" href="#" onclick="return doclink('link-48', 'Re', 'link-42');">Re</a></tt><tt class="py-op">(</tt><tt class="py-string">"(?P&lt;qwe?a=%7E&gt;X)"</tt><tt class="py-op">)</tt><tt class="py-op">)</tt> </tt>
<a name="L66"></a><tt class="py-lineno"> 66</tt>  <tt class="py-line">    <tt id="link-49" class="py-name"><a title="Martel.test.test_attrs.check_dicts" class="py-name" href="#" onclick="return doclink('link-49', 'check_dicts', 'link-21');">check_dicts</a></tt><tt class="py-op">(</tt><tt class="py-op">{</tt><tt class="py-string">"a"</tt><tt class="py-op">:</tt> <tt class="py-string">"~"</tt><tt class="py-op">}</tt><tt class="py-op">,</tt> <tt id="link-50" class="py-name"><a title="Martel.Time.attrs" class="py-name" href="#" onclick="return doclink('link-50', 'attrs', 'link-7');">attrs</a></tt><tt class="py-op">)</tt> </tt>
<a name="L67"></a><tt class="py-lineno"> 67</tt>  <tt class="py-line"> </tt>
<a name="L68"></a><tt class="py-lineno"> 68</tt>  <tt class="py-line">    <tt id="link-51" class="py-name"><a title="Bio.Encodings.IUPACEncoding.name" class="py-name" href="#" onclick="return doclink('link-51', 'name', 'link-6');">name</a></tt><tt class="py-op">,</tt> <tt id="link-52" class="py-name"><a title="Martel.Time.attrs" class="py-name" href="#" onclick="return doclink('link-52', 'attrs', 'link-7');">attrs</a></tt> <tt class="py-op">=</tt> <tt id="link-53" class="py-name"><a title="Bio.EUtils.POM.ElementNode.get_element
Martel.test.test_attrs.get_element" class="py-name" href="#" onclick="return doclink('link-53', 'get_element', 'link-22');">get_element</a></tt><tt class="py-op">(</tt><tt id="link-54" class="py-name"><a title="Martel" class="py-name" href="#" onclick="return doclink('link-54', 'Martel', 'link-0');">Martel</a></tt><tt class="py-op">.</tt><tt id="link-55" class="py-name"><a title="Martel.Re" class="py-name" href="#" onclick="return doclink('link-55', 'Re', 'link-42');">Re</a></tt><tt class="py-op">(</tt><tt class="py-string">"(?P&lt;qwe?a=%7e&gt;X)"</tt><tt class="py-op">)</tt><tt class="py-op">)</tt> </tt>
<a name="L69"></a><tt class="py-lineno"> 69</tt>  <tt class="py-line">    <tt id="link-56" class="py-name"><a title="Martel.test.test_attrs.check_dicts" class="py-name" href="#" onclick="return doclink('link-56', 'check_dicts', 'link-21');">check_dicts</a></tt><tt class="py-op">(</tt><tt class="py-op">{</tt><tt class="py-string">"a"</tt><tt class="py-op">:</tt> <tt class="py-string">"~"</tt><tt class="py-op">}</tt><tt class="py-op">,</tt> <tt id="link-57" class="py-name"><a title="Martel.Time.attrs" class="py-name" href="#" onclick="return doclink('link-57', 'attrs', 'link-7');">attrs</a></tt><tt class="py-op">)</tt> </tt>
<a name="L70"></a><tt class="py-lineno"> 70</tt>  <tt class="py-line"> </tt>
<a name="L71"></a><tt class="py-lineno"> 71</tt>  <tt class="py-line">    <tt id="link-58" class="py-name"><a title="Bio.Encodings.IUPACEncoding.name" class="py-name" href="#" onclick="return doclink('link-58', 'name', 'link-6');">name</a></tt><tt class="py-op">,</tt> <tt id="link-59" class="py-name"><a title="Martel.Time.attrs" class="py-name" href="#" onclick="return doclink('link-59', 'attrs', 'link-7');">attrs</a></tt> <tt class="py-op">=</tt> <tt id="link-60" class="py-name"><a title="Bio.EUtils.POM.ElementNode.get_element
Martel.test.test_attrs.get_element" class="py-name" href="#" onclick="return doclink('link-60', 'get_element', 'link-22');">get_element</a></tt><tt class="py-op">(</tt><tt id="link-61" class="py-name"><a title="Martel" class="py-name" href="#" onclick="return doclink('link-61', 'Martel', 'link-0');">Martel</a></tt><tt class="py-op">.</tt><tt id="link-62" class="py-name"><a title="Martel.Re" class="py-name" href="#" onclick="return doclink('link-62', 'Re', 'link-42');">Re</a></tt><tt class="py-op">(</tt><tt class="py-string">"(?P&lt;qwe?a=&gt;X)"</tt><tt class="py-op">)</tt><tt class="py-op">)</tt> </tt>
<a name="L72"></a><tt class="py-lineno"> 72</tt>  <tt class="py-line">    <tt id="link-63" class="py-name"><a title="Martel.test.test_attrs.check_dicts" class="py-name" href="#" onclick="return doclink('link-63', 'check_dicts', 'link-21');">check_dicts</a></tt><tt class="py-op">(</tt><tt class="py-op">{</tt><tt class="py-string">"a"</tt><tt class="py-op">:</tt> <tt class="py-string">""</tt><tt class="py-op">}</tt><tt class="py-op">,</tt> <tt id="link-64" class="py-name"><a title="Martel.Time.attrs" class="py-name" href="#" onclick="return doclink('link-64', 'attrs', 'link-7');">attrs</a></tt><tt class="py-op">)</tt> </tt>
<a name="L73"></a><tt class="py-lineno"> 73</tt>  <tt class="py-line"> </tt>
<a name="L74"></a><tt class="py-lineno"> 74</tt>  <tt class="py-line">    <tt id="link-65" class="py-name"><a title="Bio.Encodings.IUPACEncoding.name" class="py-name" href="#" onclick="return doclink('link-65', 'name', 'link-6');">name</a></tt><tt class="py-op">,</tt> <tt id="link-66" class="py-name"><a title="Martel.Time.attrs" class="py-name" href="#" onclick="return doclink('link-66', 'attrs', 'link-7');">attrs</a></tt> <tt class="py-op">=</tt> <tt id="link-67" class="py-name"><a title="Bio.EUtils.POM.ElementNode.get_element
Martel.test.test_attrs.get_element" class="py-name" href="#" onclick="return doclink('link-67', 'get_element', 'link-22');">get_element</a></tt><tt class="py-op">(</tt><tt id="link-68" class="py-name"><a title="Martel" class="py-name" href="#" onclick="return doclink('link-68', 'Martel', 'link-0');">Martel</a></tt><tt class="py-op">.</tt><tt id="link-69" class="py-name"><a title="Martel.Re" class="py-name" href="#" onclick="return doclink('link-69', 'Re', 'link-42');">Re</a></tt><tt class="py-op">(</tt><tt class="py-string">"(?P&lt;qwe?&gt;X)"</tt><tt class="py-op">)</tt><tt class="py-op">)</tt> </tt>
<a name="L75"></a><tt class="py-lineno"> 75</tt>  <tt class="py-line">    <tt id="link-70" class="py-name"><a title="Martel.test.test_attrs.check_dicts" class="py-name" href="#" onclick="return doclink('link-70', 'check_dicts', 'link-21');">check_dicts</a></tt><tt class="py-op">(</tt><tt class="py-op">{</tt><tt class="py-op">}</tt><tt class="py-op">,</tt> <tt id="link-71" class="py-name"><a title="Martel.Time.attrs" class="py-name" href="#" onclick="return doclink('link-71', 'attrs', 'link-7');">attrs</a></tt><tt class="py-op">)</tt> </tt>
<a name="L76"></a><tt class="py-lineno"> 76</tt>  <tt class="py-line"> </tt>
<a name="L77"></a><tt class="py-lineno"> 77</tt>  <tt class="py-line">    <tt id="link-72" class="py-name"><a title="Bio.Encodings.IUPACEncoding.name" class="py-name" href="#" onclick="return doclink('link-72', 'name', 'link-6');">name</a></tt><tt class="py-op">,</tt> <tt id="link-73" class="py-name"><a title="Martel.Time.attrs" class="py-name" href="#" onclick="return doclink('link-73', 'attrs', 'link-7');">attrs</a></tt> <tt class="py-op">=</tt> <tt id="link-74" class="py-name"><a title="Bio.EUtils.POM.ElementNode.get_element
Martel.test.test_attrs.get_element" class="py-name" href="#" onclick="return doclink('link-74', 'get_element', 'link-22');">get_element</a></tt><tt class="py-op">(</tt><tt id="link-75" class="py-name"><a title="Martel" class="py-name" href="#" onclick="return doclink('link-75', 'Martel', 'link-0');">Martel</a></tt><tt class="py-op">.</tt><tt id="link-76" class="py-name"><a title="Martel.Re" class="py-name" href="#" onclick="return doclink('link-76', 'Re', 'link-42');">Re</a></tt><tt class="py-op">(</tt><tt class="py-string">"(?P&lt;qwe?a=%48%65%6c%6c%6f&gt;X)"</tt><tt class="py-op">)</tt><tt class="py-op">)</tt> </tt>
<a name="L78"></a><tt class="py-lineno"> 78</tt>  <tt class="py-line">    <tt id="link-77" class="py-name"><a title="Martel.test.test_attrs.check_dicts" class="py-name" href="#" onclick="return doclink('link-77', 'check_dicts', 'link-21');">check_dicts</a></tt><tt class="py-op">(</tt><tt class="py-op">{</tt><tt class="py-string">"a"</tt><tt class="py-op">:</tt> <tt class="py-string">"Hello"</tt><tt class="py-op">}</tt><tt class="py-op">,</tt> <tt id="link-78" class="py-name"><a title="Martel.Time.attrs" class="py-name" href="#" onclick="return doclink('link-78', 'attrs', 'link-7');">attrs</a></tt><tt class="py-op">)</tt> </tt>
<a name="L79"></a><tt class="py-lineno"> 79</tt>  <tt class="py-line"> </tt>
<a name="L80"></a><tt class="py-lineno"> 80</tt>  <tt class="py-line">    <tt id="link-79" class="py-name"><a title="Bio.Encodings.IUPACEncoding.name" class="py-name" href="#" onclick="return doclink('link-79', 'name', 'link-6');">name</a></tt><tt class="py-op">,</tt> <tt id="link-80" class="py-name"><a title="Martel.Time.attrs" class="py-name" href="#" onclick="return doclink('link-80', 'attrs', 'link-7');">attrs</a></tt> <tt class="py-op">=</tt> <tt id="link-81" class="py-name"><a title="Bio.EUtils.POM.ElementNode.get_element
Martel.test.test_attrs.get_element" class="py-name" href="#" onclick="return doclink('link-81', 'get_element', 'link-22');">get_element</a></tt><tt class="py-op">(</tt><tt id="link-82" class="py-name"><a title="Martel" class="py-name" href="#" onclick="return doclink('link-82', 'Martel', 'link-0');">Martel</a></tt><tt class="py-op">.</tt><tt id="link-83" class="py-name"><a title="Martel.Re" class="py-name" href="#" onclick="return doclink('link-83', 'Re', 'link-42');">Re</a></tt><tt class="py-op">(</tt><tt class="py-string">"(?P&lt;qwe?a=%7e%7E&amp;b=%7e%7E&gt;X)"</tt><tt class="py-op">)</tt><tt class="py-op">)</tt> </tt>
<a name="L81"></a><tt class="py-lineno"> 81</tt>  <tt class="py-line">    <tt id="link-84" class="py-name"><a title="Martel.test.test_attrs.check_dicts" class="py-name" href="#" onclick="return doclink('link-84', 'check_dicts', 'link-21');">check_dicts</a></tt><tt class="py-op">(</tt><tt class="py-op">{</tt><tt class="py-string">"a"</tt><tt class="py-op">:</tt> <tt class="py-string">"~~"</tt><tt class="py-op">,</tt> <tt class="py-string">"b"</tt><tt class="py-op">:</tt> <tt class="py-string">"~~"</tt><tt class="py-op">}</tt><tt class="py-op">,</tt> <tt id="link-85" class="py-name"><a title="Martel.Time.attrs" class="py-name" href="#" onclick="return doclink('link-85', 'attrs', 'link-7');">attrs</a></tt><tt class="py-op">)</tt> </tt>
<a name="L82"></a><tt class="py-lineno"> 82</tt>  <tt class="py-line"> </tt>
<a name="L83"></a><tt class="py-lineno"> 83</tt>  <tt class="py-line">    <tt id="link-86" class="py-name"><a title="Bio.Encodings.IUPACEncoding.name" class="py-name" href="#" onclick="return doclink('link-86', 'name', 'link-6');">name</a></tt><tt class="py-op">,</tt> <tt id="link-87" class="py-name"><a title="Martel.Time.attrs" class="py-name" href="#" onclick="return doclink('link-87', 'attrs', 'link-7');">attrs</a></tt> <tt class="py-op">=</tt> <tt id="link-88" class="py-name"><a title="Bio.EUtils.POM.ElementNode.get_element
Martel.test.test_attrs.get_element" class="py-name" href="#" onclick="return doclink('link-88', 'get_element', 'link-22');">get_element</a></tt><tt class="py-op">(</tt><tt id="link-89" class="py-name"><a title="Martel" class="py-name" href="#" onclick="return doclink('link-89', 'Martel', 'link-0');">Martel</a></tt><tt class="py-op">.</tt><tt id="link-90" class="py-name"><a title="Martel.Re" class="py-name" href="#" onclick="return doclink('link-90', 'Re', 'link-42');">Re</a></tt><tt class="py-op">(</tt><tt class="py-string">"(?P&lt;qwe?a=%7e%7E&amp;b=&gt;X)"</tt><tt class="py-op">)</tt><tt class="py-op">)</tt> </tt>
<a name="L84"></a><tt class="py-lineno"> 84</tt>  <tt class="py-line">    <tt id="link-91" class="py-name"><a title="Martel.test.test_attrs.check_dicts" class="py-name" href="#" onclick="return doclink('link-91', 'check_dicts', 'link-21');">check_dicts</a></tt><tt class="py-op">(</tt><tt class="py-op">{</tt><tt class="py-string">"a"</tt><tt class="py-op">:</tt> <tt class="py-string">"~~"</tt><tt class="py-op">,</tt> <tt class="py-string">"b"</tt><tt class="py-op">:</tt> <tt class="py-string">""</tt><tt class="py-op">}</tt><tt class="py-op">,</tt> <tt id="link-92" class="py-name"><a title="Martel.Time.attrs" class="py-name" href="#" onclick="return doclink('link-92', 'attrs', 'link-7');">attrs</a></tt><tt class="py-op">)</tt> </tt>
</div><a name="L85"></a><tt class="py-lineno"> 85</tt>  <tt class="py-line"> </tt>
<a name="test_same_tag"></a><div id="test_same_tag-def"><a name="L86"></a><tt class="py-lineno"> 86</tt> <a class="py-toggle" href="#" id="test_same_tag-toggle" onclick="return toggle('test_same_tag');">-</a><tt class="py-line"><tt class="py-keyword">def</tt> <a class="py-def-name" href="Martel.test.test_attrs-module.html#test_same_tag">test_same_tag</a><tt class="py-op">(</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="test_same_tag-collapsed" style="display:none;" pad="+++" indent="++++"></div><div id="test_same_tag-expanded"><a name="L87"></a><tt class="py-lineno"> 87</tt>  <tt class="py-line">    <tt id="link-93" class="py-name"><a title="Bio.Restriction.Restriction.RestrictionBatch.format
Bio.expressions.blast.ncbiblast.format
Bio.expressions.blast.wublast.format
Bio.expressions.blocks.format
Bio.expressions.embl.embl65.format
Bio.expressions.fasta.format
Bio.expressions.genbank.format
Bio.expressions.hmmpfam.format
Bio.expressions.swissprot.ipi.format
Bio.expressions.swissprot.speclist.format
Bio.expressions.swissprot.sprot38.format
Bio.expressions.swissprot.sprot40.format
Bio.expressions.transfac.format
Martel.test.test_swissprot38.format
Martel.test.testformats.swissprot38.format" class="py-name" href="#" onclick="return doclink('link-93', 'format', 'link-8');">format</a></tt> <tt class="py-op">=</tt> <tt id="link-94" class="py-name"><a title="Martel" class="py-name" href="#" onclick="return doclink('link-94', 'Martel', 'link-0');">Martel</a></tt><tt class="py-op">.</tt><tt id="link-95" class="py-name"><a title="Martel.Re" class="py-name" href="#" onclick="return doclink('link-95', 'Re', 'link-42');">Re</a></tt><tt class="py-op">(</tt><tt class="py-string">"(?P&lt;char?type=a&gt;a+)(?P&lt;char?type=b&gt;b+)"</tt><tt class="py-op">)</tt> </tt>
<a name="L88"></a><tt class="py-lineno"> 88</tt>  <tt class="py-line">    <tt class="py-name">parser</tt> <tt class="py-op">=</tt> <tt id="link-96" class="py-name"><a title="Bio.Restriction.Restriction.RestrictionBatch.format
Bio.expressions.blast.ncbiblast.format
Bio.expressions.blast.wublast.format
Bio.expressions.blocks.format
Bio.expressions.embl.embl65.format
Bio.expressions.fasta.format
Bio.expressions.genbank.format
Bio.expressions.hmmpfam.format
Bio.expressions.swissprot.ipi.format
Bio.expressions.swissprot.speclist.format
Bio.expressions.swissprot.sprot38.format
Bio.expressions.swissprot.sprot40.format
Bio.expressions.transfac.format
Martel.test.test_swissprot38.format
Martel.test.testformats.swissprot38.format" class="py-name" href="#" onclick="return doclink('link-96', 'format', 'link-8');">format</a></tt><tt class="py-op">.</tt><tt id="link-97" class="py-name"><a title="Bio.config.FormatRegistry.FormatObject.make_parser
Bio.config._support.make_cached_expression.make_parser
Martel.Expression.Expression.make_parser
Martel.Expression.HeaderFooter.make_parser
Martel.Expression.ParseRecords.make_parser" class="py-name" href="#" onclick="return doclink('link-97', 'make_parser', 'link-9');">make_parser</a></tt><tt class="py-op">(</tt><tt class="py-op">)</tt> </tt>
<a name="L89"></a><tt class="py-lineno"> 89</tt>  <tt class="py-line">    <tt class="py-name">grab</tt> <tt class="py-op">=</tt> <tt id="link-98" class="py-name"><a title="Martel.test.test_attrs.GrabElements" class="py-name" href="#" onclick="return doclink('link-98', 'GrabElements', 'link-10');">GrabElements</a></tt><tt class="py-op">(</tt><tt class="py-op">)</tt> </tt>
<a name="L90"></a><tt class="py-lineno"> 90</tt>  <tt class="py-line">    <tt class="py-name">parser</tt><tt class="py-op">.</tt><tt class="py-name">setContentHandler</tt><tt class="py-op">(</tt><tt class="py-name">grab</tt><tt class="py-op">)</tt> </tt>
<a name="L91"></a><tt class="py-lineno"> 91</tt>  <tt class="py-line">    <tt class="py-name">parser</tt><tt class="py-op">.</tt><tt id="link-99" class="py-name"><a title="Martel.Parser.HeaderFooterParser.parseString
Martel.Parser.Parser.parseString
Martel.Parser.RecordParser.parseString" class="py-name" href="#" onclick="return doclink('link-99', 'parseString', 'link-11');">parseString</a></tt><tt class="py-op">(</tt><tt class="py-string">"aaabb"</tt><tt class="py-op">)</tt> </tt>
<a name="L92"></a><tt class="py-lineno"> 92</tt>  <tt class="py-line">    <tt class="py-keyword">assert</tt> <tt class="py-name">len</tt><tt class="py-op">(</tt><tt class="py-name">grab</tt><tt class="py-op">.</tt><tt id="link-100" class="py-name"><a title="Bio.Restriction.Restriction.RestrictionBatch.elements" class="py-name" href="#" onclick="return doclink('link-100', 'elements', 'link-3');">elements</a></tt><tt class="py-op">)</tt> <tt class="py-op">==</tt> <tt class="py-number">2</tt><tt class="py-op">,</tt> <tt class="py-name">len</tt><tt class="py-op">(</tt><tt class="py-name">grab</tt><tt class="py-op">.</tt><tt id="link-101" class="py-name"><a title="Bio.Restriction.Restriction.RestrictionBatch.elements" class="py-name" href="#" onclick="return doclink('link-101', 'elements', 'link-3');">elements</a></tt><tt class="py-op">)</tt> </tt>
<a name="L93"></a><tt class="py-lineno"> 93</tt>  <tt class="py-line"> </tt>
<a name="L94"></a><tt class="py-lineno"> 94</tt>  <tt class="py-line">    <tt id="link-102" class="py-name"><a title="Martel.test.test_attrs.check_element" class="py-name" href="#" onclick="return doclink('link-102', 'check_element', 'link-27');">check_element</a></tt><tt class="py-op">(</tt><tt class="py-name">grab</tt><tt class="py-op">.</tt><tt id="link-103" class="py-name"><a title="Bio.Restriction.Restriction.RestrictionBatch.elements" class="py-name" href="#" onclick="return doclink('link-103', 'elements', 'link-3');">elements</a></tt><tt class="py-op">[</tt><tt class="py-number">0</tt><tt class="py-op">]</tt><tt class="py-op">,</tt> <tt class="py-op">(</tt><tt class="py-string">"char"</tt><tt class="py-op">,</tt> <tt class="py-op">{</tt><tt class="py-string">"type"</tt><tt class="py-op">:</tt> <tt class="py-string">"a"</tt><tt class="py-op">}</tt><tt class="py-op">)</tt><tt class="py-op">)</tt> </tt>
<a name="L95"></a><tt class="py-lineno"> 95</tt>  <tt class="py-line">    <tt id="link-104" class="py-name"><a title="Martel.test.test_attrs.check_element" class="py-name" href="#" onclick="return doclink('link-104', 'check_element', 'link-27');">check_element</a></tt><tt class="py-op">(</tt><tt class="py-name">grab</tt><tt class="py-op">.</tt><tt id="link-105" class="py-name"><a title="Bio.Restriction.Restriction.RestrictionBatch.elements" class="py-name" href="#" onclick="return doclink('link-105', 'elements', 'link-3');">elements</a></tt><tt class="py-op">[</tt><tt class="py-number">1</tt><tt class="py-op">]</tt><tt class="py-op">,</tt> <tt class="py-op">(</tt><tt class="py-string">"char"</tt><tt class="py-op">,</tt> <tt class="py-op">{</tt><tt class="py-string">"type"</tt><tt class="py-op">:</tt> <tt class="py-string">"b"</tt><tt class="py-op">}</tt><tt class="py-op">)</tt><tt class="py-op">)</tt> </tt>
</div><a name="L96"></a><tt class="py-lineno"> 96</tt>  <tt class="py-line">     </tt>
<a name="L97"></a><tt class="py-lineno"> 97</tt>  <tt class="py-line"> </tt>
<a name="test_record_parser"></a><div id="test_record_parser-def"><a name="L98"></a><tt class="py-lineno"> 98</tt> <a class="py-toggle" href="#" id="test_record_parser-toggle" onclick="return toggle('test_record_parser');">-</a><tt class="py-line"><tt class="py-keyword">def</tt> <a class="py-def-name" href="Martel.test.test_attrs-module.html#test_record_parser">test_record_parser</a><tt class="py-op">(</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="test_record_parser-collapsed" style="display:none;" pad="+++" indent="++++"></div><div id="test_record_parser-expanded"><a name="L99"></a><tt class="py-lineno"> 99</tt>  <tt class="py-line">    <tt id="link-106" class="py-name"><a title="Bio.Restriction.Restriction.RestrictionBatch.format
Bio.expressions.blast.ncbiblast.format
Bio.expressions.blast.wublast.format
Bio.expressions.blocks.format
Bio.expressions.embl.embl65.format
Bio.expressions.fasta.format
Bio.expressions.genbank.format
Bio.expressions.hmmpfam.format
Bio.expressions.swissprot.ipi.format
Bio.expressions.swissprot.speclist.format
Bio.expressions.swissprot.sprot38.format
Bio.expressions.swissprot.sprot40.format
Bio.expressions.transfac.format
Martel.test.test_swissprot38.format
Martel.test.testformats.swissprot38.format" class="py-name" href="#" onclick="return doclink('link-106', 'format', 'link-8');">format</a></tt> <tt class="py-op">=</tt> <tt id="link-107" class="py-name"><a title="Martel" class="py-name" href="#" onclick="return doclink('link-107', 'Martel', 'link-0');">Martel</a></tt><tt class="py-op">.</tt><tt id="link-108" class="py-name"><a title="Martel.Re" class="py-name" href="#" onclick="return doclink('link-108', 'Re', 'link-42');">Re</a></tt><tt class="py-op">(</tt><tt class="py-string">"(?P&lt;term?field=first&gt;...)"</tt> </tt>
<a name="L100"></a><tt class="py-lineno">100</tt>  <tt class="py-line">                       <tt class="py-string">"(?P&lt;term?field=second&gt;...)"</tt> </tt>
<a name="L101"></a><tt class="py-lineno">101</tt>  <tt class="py-line">                       <tt class="py-string">"(?P&lt;last&gt;.)\R"</tt><tt class="py-op">)</tt> </tt>
<a name="L102"></a><tt class="py-lineno">102</tt>  <tt class="py-line">    <tt id="link-109" class="py-name"><a title="Bio.Restriction.Restriction.RestrictionBatch.format
Bio.expressions.blast.ncbiblast.format
Bio.expressions.blast.wublast.format
Bio.expressions.blocks.format
Bio.expressions.embl.embl65.format
Bio.expressions.fasta.format
Bio.expressions.genbank.format
Bio.expressions.hmmpfam.format
Bio.expressions.swissprot.ipi.format
Bio.expressions.swissprot.speclist.format
Bio.expressions.swissprot.sprot38.format
Bio.expressions.swissprot.sprot40.format
Bio.expressions.transfac.format
Martel.test.test_swissprot38.format
Martel.test.testformats.swissprot38.format" class="py-name" href="#" onclick="return doclink('link-109', 'format', 'link-8');">format</a></tt> <tt class="py-op">=</tt> <tt id="link-110" class="py-name"><a title="Martel" class="py-name" href="#" onclick="return doclink('link-110', 'Martel', 'link-0');">Martel</a></tt><tt class="py-op">.</tt><tt id="link-111" class="py-name" targets="Class Martel.Expression.ParseRecords=Martel.Expression.ParseRecords-class.html"><a title="Martel.Expression.ParseRecords" class="py-name" href="#" onclick="return doclink('link-111', 'ParseRecords', 'link-111');">ParseRecords</a></tt><tt class="py-op">(</tt><tt class="py-string">"all"</tt><tt class="py-op">,</tt> <tt class="py-op">{</tt><tt class="py-string">"author"</tt><tt class="py-op">:</tt> <tt class="py-string">"guido"</tt><tt class="py-op">}</tt><tt class="py-op">,</tt> <tt id="link-112" class="py-name"><a title="Bio.Restriction.Restriction.RestrictionBatch.format
Bio.expressions.blast.ncbiblast.format
Bio.expressions.blast.wublast.format
Bio.expressions.blocks.format
Bio.expressions.embl.embl65.format
Bio.expressions.fasta.format
Bio.expressions.genbank.format
Bio.expressions.hmmpfam.format
Bio.expressions.swissprot.ipi.format
Bio.expressions.swissprot.speclist.format
Bio.expressions.swissprot.sprot38.format
Bio.expressions.swissprot.sprot40.format
Bio.expressions.transfac.format
Martel.test.test_swissprot38.format
Martel.test.testformats.swissprot38.format" class="py-name" href="#" onclick="return doclink('link-112', 'format', 'link-8');">format</a></tt><tt class="py-op">,</tt> </tt>
<a name="L103"></a><tt class="py-lineno">103</tt>  <tt class="py-line">                                 <tt id="link-113" class="py-name"><a title="Martel.RecordReader
Martel.RecordReader.RecordReader" class="py-name" href="#" onclick="return doclink('link-113', 'RecordReader', 'link-2');">RecordReader</a></tt><tt class="py-op">.</tt><tt id="link-114" class="py-name" targets="Class Martel.RecordReader.CountLines=Martel.RecordReader.CountLines-class.html"><a title="Martel.RecordReader.CountLines" class="py-name" href="#" onclick="return doclink('link-114', 'CountLines', 'link-114');">CountLines</a></tt><tt class="py-op">,</tt> <tt class="py-op">(</tt><tt class="py-number">1</tt><tt class="py-op">,</tt><tt class="py-op">)</tt> <tt class="py-op">)</tt> </tt>
<a name="L104"></a><tt class="py-lineno">104</tt>  <tt class="py-line">    <tt class="py-name">parser</tt> <tt class="py-op">=</tt> <tt id="link-115" class="py-name"><a title="Bio.Restriction.Restriction.RestrictionBatch.format
Bio.expressions.blast.ncbiblast.format
Bio.expressions.blast.wublast.format
Bio.expressions.blocks.format
Bio.expressions.embl.embl65.format
Bio.expressions.fasta.format
Bio.expressions.genbank.format
Bio.expressions.hmmpfam.format
Bio.expressions.swissprot.ipi.format
Bio.expressions.swissprot.speclist.format
Bio.expressions.swissprot.sprot38.format
Bio.expressions.swissprot.sprot40.format
Bio.expressions.transfac.format
Martel.test.test_swissprot38.format
Martel.test.testformats.swissprot38.format" class="py-name" href="#" onclick="return doclink('link-115', 'format', 'link-8');">format</a></tt><tt class="py-op">.</tt><tt id="link-116" class="py-name"><a title="Bio.config.FormatRegistry.FormatObject.make_parser
Bio.config._support.make_cached_expression.make_parser
Martel.Expression.Expression.make_parser
Martel.Expression.HeaderFooter.make_parser
Martel.Expression.ParseRecords.make_parser" class="py-name" href="#" onclick="return doclink('link-116', 'make_parser', 'link-9');">make_parser</a></tt><tt class="py-op">(</tt><tt class="py-op">)</tt> </tt>
<a name="L105"></a><tt class="py-lineno">105</tt>  <tt class="py-line">    <tt class="py-name">grab</tt> <tt class="py-op">=</tt> <tt id="link-117" class="py-name"><a title="Martel.test.test_attrs.GrabElements" class="py-name" href="#" onclick="return doclink('link-117', 'GrabElements', 'link-10');">GrabElements</a></tt><tt class="py-op">(</tt><tt class="py-op">)</tt> </tt>
<a name="L106"></a><tt class="py-lineno">106</tt>  <tt class="py-line">    <tt class="py-name">parser</tt><tt class="py-op">.</tt><tt class="py-name">setContentHandler</tt><tt class="py-op">(</tt><tt class="py-name">grab</tt><tt class="py-op">)</tt> </tt>
<a name="L107"></a><tt class="py-lineno">107</tt>  <tt class="py-line">    <tt class="py-name">parser</tt><tt class="py-op">.</tt><tt id="link-118" class="py-name"><a title="Martel.Parser.HeaderFooterParser.parseString
Martel.Parser.Parser.parseString
Martel.Parser.RecordParser.parseString" class="py-name" href="#" onclick="return doclink('link-118', 'parseString', 'link-11');">parseString</a></tt><tt class="py-op">(</tt><tt class="py-string">"aaabbbZ\ncccdddZ\n"</tt><tt class="py-op">)</tt> </tt>
<a name="L108"></a><tt class="py-lineno">108</tt>  <tt class="py-line">    <tt id="link-119" class="py-name"><a title="Bio.Restriction.Restriction.RestrictionBatch.elements" class="py-name" href="#" onclick="return doclink('link-119', 'elements', 'link-3');">elements</a></tt> <tt class="py-op">=</tt> <tt class="py-name">grab</tt><tt class="py-op">.</tt><tt id="link-120" class="py-name"><a title="Bio.Restriction.Restriction.RestrictionBatch.elements" class="py-name" href="#" onclick="return doclink('link-120', 'elements', 'link-3');">elements</a></tt> </tt>
<a name="L109"></a><tt class="py-lineno">109</tt>  <tt class="py-line">    <tt class="py-keyword">assert</tt> <tt class="py-name">len</tt><tt class="py-op">(</tt><tt id="link-121" class="py-name"><a title="Bio.Restriction.Restriction.RestrictionBatch.elements" class="py-name" href="#" onclick="return doclink('link-121', 'elements', 'link-3');">elements</a></tt><tt class="py-op">)</tt> <tt class="py-op">==</tt> <tt class="py-number">7</tt> </tt>
<a name="L110"></a><tt class="py-lineno">110</tt>  <tt class="py-line">    <tt id="link-122" class="py-name"><a title="Martel.test.test_attrs.check_element" class="py-name" href="#" onclick="return doclink('link-122', 'check_element', 'link-27');">check_element</a></tt><tt class="py-op">(</tt><tt id="link-123" class="py-name"><a title="Bio.Restriction.Restriction.RestrictionBatch.elements" class="py-name" href="#" onclick="return doclink('link-123', 'elements', 'link-3');">elements</a></tt><tt class="py-op">[</tt><tt class="py-number">0</tt><tt class="py-op">]</tt><tt class="py-op">,</tt> <tt class="py-op">(</tt><tt class="py-string">"all"</tt><tt class="py-op">,</tt> <tt class="py-op">{</tt><tt class="py-string">"author"</tt><tt class="py-op">:</tt> <tt class="py-string">"guido"</tt><tt class="py-op">}</tt><tt class="py-op">)</tt><tt class="py-op">)</tt> </tt>
<a name="L111"></a><tt class="py-lineno">111</tt>  <tt class="py-line">    <tt id="link-124" class="py-name"><a title="Martel.test.test_attrs.check_element" class="py-name" href="#" onclick="return doclink('link-124', 'check_element', 'link-27');">check_element</a></tt><tt class="py-op">(</tt><tt id="link-125" class="py-name"><a title="Bio.Restriction.Restriction.RestrictionBatch.elements" class="py-name" href="#" onclick="return doclink('link-125', 'elements', 'link-3');">elements</a></tt><tt class="py-op">[</tt><tt class="py-number">1</tt><tt class="py-op">]</tt><tt class="py-op">,</tt> <tt class="py-op">(</tt><tt class="py-string">"term"</tt><tt class="py-op">,</tt> <tt class="py-op">{</tt><tt class="py-string">"field"</tt><tt class="py-op">:</tt> <tt class="py-string">"first"</tt><tt class="py-op">}</tt><tt class="py-op">)</tt><tt class="py-op">)</tt> </tt>
<a name="L112"></a><tt class="py-lineno">112</tt>  <tt class="py-line">    <tt id="link-126" class="py-name"><a title="Martel.test.test_attrs.check_element" class="py-name" href="#" onclick="return doclink('link-126', 'check_element', 'link-27');">check_element</a></tt><tt class="py-op">(</tt><tt id="link-127" class="py-name"><a title="Bio.Restriction.Restriction.RestrictionBatch.elements" class="py-name" href="#" onclick="return doclink('link-127', 'elements', 'link-3');">elements</a></tt><tt class="py-op">[</tt><tt class="py-number">2</tt><tt class="py-op">]</tt><tt class="py-op">,</tt> <tt class="py-op">(</tt><tt class="py-string">"term"</tt><tt class="py-op">,</tt> <tt class="py-op">{</tt><tt class="py-string">"field"</tt><tt class="py-op">:</tt> <tt class="py-string">"second"</tt><tt class="py-op">}</tt><tt class="py-op">)</tt><tt class="py-op">)</tt> </tt>
<a name="L113"></a><tt class="py-lineno">113</tt>  <tt class="py-line">    <tt id="link-128" class="py-name"><a title="Martel.test.test_attrs.check_element" class="py-name" href="#" onclick="return doclink('link-128', 'check_element', 'link-27');">check_element</a></tt><tt class="py-op">(</tt><tt id="link-129" class="py-name"><a title="Bio.Restriction.Restriction.RestrictionBatch.elements" class="py-name" href="#" onclick="return doclink('link-129', 'elements', 'link-3');">elements</a></tt><tt class="py-op">[</tt><tt class="py-number">3</tt><tt class="py-op">]</tt><tt class="py-op">,</tt> <tt class="py-op">(</tt><tt class="py-string">"last"</tt><tt class="py-op">,</tt> <tt class="py-op">{</tt><tt class="py-op">}</tt><tt class="py-op">)</tt><tt class="py-op">)</tt> </tt>
<a name="L114"></a><tt class="py-lineno">114</tt>  <tt class="py-line">    <tt id="link-130" class="py-name"><a title="Martel.test.test_attrs.check_element" class="py-name" href="#" onclick="return doclink('link-130', 'check_element', 'link-27');">check_element</a></tt><tt class="py-op">(</tt><tt id="link-131" class="py-name"><a title="Bio.Restriction.Restriction.RestrictionBatch.elements" class="py-name" href="#" onclick="return doclink('link-131', 'elements', 'link-3');">elements</a></tt><tt class="py-op">[</tt><tt class="py-number">4</tt><tt class="py-op">]</tt><tt class="py-op">,</tt> <tt class="py-op">(</tt><tt class="py-string">"term"</tt><tt class="py-op">,</tt> <tt class="py-op">{</tt><tt class="py-string">"field"</tt><tt class="py-op">:</tt> <tt class="py-string">"first"</tt><tt class="py-op">}</tt><tt class="py-op">)</tt><tt class="py-op">)</tt> </tt>
<a name="L115"></a><tt class="py-lineno">115</tt>  <tt class="py-line">    <tt id="link-132" class="py-name"><a title="Martel.test.test_attrs.check_element" class="py-name" href="#" onclick="return doclink('link-132', 'check_element', 'link-27');">check_element</a></tt><tt class="py-op">(</tt><tt id="link-133" class="py-name"><a title="Bio.Restriction.Restriction.RestrictionBatch.elements" class="py-name" href="#" onclick="return doclink('link-133', 'elements', 'link-3');">elements</a></tt><tt class="py-op">[</tt><tt class="py-number">5</tt><tt class="py-op">]</tt><tt class="py-op">,</tt> <tt class="py-op">(</tt><tt class="py-string">"term"</tt><tt class="py-op">,</tt> <tt class="py-op">{</tt><tt class="py-string">"field"</tt><tt class="py-op">:</tt> <tt class="py-string">"second"</tt><tt class="py-op">}</tt><tt class="py-op">)</tt><tt class="py-op">)</tt> </tt>
<a name="L116"></a><tt class="py-lineno">116</tt>  <tt class="py-line">    <tt id="link-134" class="py-name"><a title="Martel.test.test_attrs.check_element" class="py-name" href="#" onclick="return doclink('link-134', 'check_element', 'link-27');">check_element</a></tt><tt class="py-op">(</tt><tt id="link-135" class="py-name"><a title="Bio.Restriction.Restriction.RestrictionBatch.elements" class="py-name" href="#" onclick="return doclink('link-135', 'elements', 'link-3');">elements</a></tt><tt class="py-op">[</tt><tt class="py-number">6</tt><tt class="py-op">]</tt><tt class="py-op">,</tt> <tt class="py-op">(</tt><tt class="py-string">"last"</tt><tt class="py-op">,</tt> <tt class="py-op">{</tt><tt class="py-op">}</tt><tt class="py-op">)</tt><tt class="py-op">)</tt> </tt>
</div><a name="L117"></a><tt class="py-lineno">117</tt>  <tt class="py-line">     </tt>
<a name="L118"></a><tt class="py-lineno">118</tt>  <tt class="py-line"> </tt>
<a name="test_header_footer_parser"></a><div id="test_header_footer_parser-def"><a name="L119"></a><tt class="py-lineno">119</tt> <a class="py-toggle" href="#" id="test_header_footer_parser-toggle" onclick="return toggle('test_header_footer_parser');">-</a><tt class="py-line"><tt class="py-keyword">def</tt> <a class="py-def-name" href="Martel.test.test_attrs-module.html#test_header_footer_parser">test_header_footer_parser</a><tt class="py-op">(</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="test_header_footer_parser-collapsed" style="display:none;" pad="+++" indent="++++"></div><div id="test_header_footer_parser-expanded"><a name="L120"></a><tt class="py-lineno">120</tt>  <tt class="py-line">    <tt class="py-comment"># Check that I can pass same tag names in the header, record and</tt> </tt>
<a name="L121"></a><tt class="py-lineno">121</tt>  <tt class="py-line"><tt class="py-comment"></tt>    <tt class="py-comment"># footer but not have them collide.</tt> </tt>
<a name="L122"></a><tt class="py-lineno">122</tt>  <tt class="py-line"><tt class="py-comment"></tt> </tt>
<a name="L123"></a><tt class="py-lineno">123</tt>  <tt class="py-line">    <tt class="py-name">header_format</tt> <tt class="py-op">=</tt> <tt id="link-136" class="py-name"><a title="Martel" class="py-name" href="#" onclick="return doclink('link-136', 'Martel', 'link-0');">Martel</a></tt><tt class="py-op">.</tt><tt id="link-137" class="py-name"><a title="Martel.Re" class="py-name" href="#" onclick="return doclink('link-137', 'Re', 'link-42');">Re</a></tt><tt class="py-op">(</tt><tt class="py-string">"(?P&lt;term?pos=header&gt;a+)\R"</tt><tt class="py-op">)</tt> </tt>
<a name="L124"></a><tt class="py-lineno">124</tt>  <tt class="py-line">    <tt class="py-name">record_format</tt> <tt class="py-op">=</tt> <tt id="link-138" class="py-name"><a title="Martel" class="py-name" href="#" onclick="return doclink('link-138', 'Martel', 'link-0');">Martel</a></tt><tt class="py-op">.</tt><tt id="link-139" class="py-name"><a title="Martel.Re" class="py-name" href="#" onclick="return doclink('link-139', 'Re', 'link-42');">Re</a></tt><tt class="py-op">(</tt><tt class="py-string">"(?P&lt;term?pos=body&gt;b+)\R"</tt><tt class="py-op">)</tt> </tt>
<a name="L125"></a><tt class="py-lineno">125</tt>  <tt class="py-line">    <tt class="py-name">footer_format</tt> <tt class="py-op">=</tt> <tt id="link-140" class="py-name"><a title="Martel" class="py-name" href="#" onclick="return doclink('link-140', 'Martel', 'link-0');">Martel</a></tt><tt class="py-op">.</tt><tt id="link-141" class="py-name"><a title="Martel.Re" class="py-name" href="#" onclick="return doclink('link-141', 'Re', 'link-42');">Re</a></tt><tt class="py-op">(</tt><tt class="py-string">"(?P&lt;term?pos=footer&gt;c+)\R"</tt><tt class="py-op">)</tt> </tt>
<a name="L126"></a><tt class="py-lineno">126</tt>  <tt class="py-line"> </tt>
<a name="L127"></a><tt class="py-lineno">127</tt>  <tt class="py-line">    <tt id="link-142" class="py-name"><a title="Bio.Restriction.Restriction.RestrictionBatch.format
Bio.expressions.blast.ncbiblast.format
Bio.expressions.blast.wublast.format
Bio.expressions.blocks.format
Bio.expressions.embl.embl65.format
Bio.expressions.fasta.format
Bio.expressions.genbank.format
Bio.expressions.hmmpfam.format
Bio.expressions.swissprot.ipi.format
Bio.expressions.swissprot.speclist.format
Bio.expressions.swissprot.sprot38.format
Bio.expressions.swissprot.sprot40.format
Bio.expressions.transfac.format
Martel.test.test_swissprot38.format
Martel.test.testformats.swissprot38.format" class="py-name" href="#" onclick="return doclink('link-142', 'format', 'link-8');">format</a></tt> <tt class="py-op">=</tt> <tt id="link-143" class="py-name"><a title="Martel" class="py-name" href="#" onclick="return doclink('link-143', 'Martel', 'link-0');">Martel</a></tt><tt class="py-op">.</tt><tt id="link-144" class="py-name" targets="Class Martel.Expression.HeaderFooter=Martel.Expression.HeaderFooter-class.html"><a title="Martel.Expression.HeaderFooter" class="py-name" href="#" onclick="return doclink('link-144', 'HeaderFooter', 'link-144');">HeaderFooter</a></tt><tt class="py-op">(</tt> </tt>
<a name="L128"></a><tt class="py-lineno">128</tt>  <tt class="py-line">        <tt class="py-string">"all"</tt><tt class="py-op">,</tt> <tt class="py-op">{</tt><tt class="py-string">"state"</tt><tt class="py-op">:</tt> <tt class="py-string">"New Mexico"</tt><tt class="py-op">}</tt><tt class="py-op">,</tt> </tt>
<a name="L129"></a><tt class="py-lineno">129</tt>  <tt class="py-line">        <tt class="py-name">header_format</tt><tt class="py-op">,</tt> <tt id="link-145" class="py-name"><a title="Martel.RecordReader
Martel.RecordReader.RecordReader" class="py-name" href="#" onclick="return doclink('link-145', 'RecordReader', 'link-2');">RecordReader</a></tt><tt class="py-op">.</tt><tt id="link-146" class="py-name"><a title="Martel.RecordReader.CountLines" class="py-name" href="#" onclick="return doclink('link-146', 'CountLines', 'link-114');">CountLines</a></tt><tt class="py-op">,</tt> <tt class="py-op">(</tt><tt class="py-number">1</tt><tt class="py-op">,</tt><tt class="py-op">)</tt><tt class="py-op">,</tt> </tt>
<a name="L130"></a><tt class="py-lineno">130</tt>  <tt class="py-line">        <tt class="py-name">record_format</tt><tt class="py-op">,</tt> <tt id="link-147" class="py-name"><a title="Martel.RecordReader
Martel.RecordReader.RecordReader" class="py-name" href="#" onclick="return doclink('link-147', 'RecordReader', 'link-2');">RecordReader</a></tt><tt class="py-op">.</tt><tt id="link-148" class="py-name"><a title="Martel.RecordReader.CountLines" class="py-name" href="#" onclick="return doclink('link-148', 'CountLines', 'link-114');">CountLines</a></tt><tt class="py-op">,</tt> <tt class="py-op">(</tt><tt class="py-number">1</tt><tt class="py-op">,</tt><tt class="py-op">)</tt><tt class="py-op">,</tt> </tt>
<a name="L131"></a><tt class="py-lineno">131</tt>  <tt class="py-line">        <tt class="py-name">footer_format</tt><tt class="py-op">,</tt> <tt id="link-149" class="py-name"><a title="Martel.RecordReader
Martel.RecordReader.RecordReader" class="py-name" href="#" onclick="return doclink('link-149', 'RecordReader', 'link-2');">RecordReader</a></tt><tt class="py-op">.</tt><tt id="link-150" class="py-name"><a title="Martel.RecordReader.CountLines" class="py-name" href="#" onclick="return doclink('link-150', 'CountLines', 'link-114');">CountLines</a></tt><tt class="py-op">,</tt> <tt class="py-op">(</tt><tt class="py-number">1</tt><tt class="py-op">,</tt><tt class="py-op">)</tt><tt class="py-op">,</tt> </tt>
<a name="L132"></a><tt class="py-lineno">132</tt>  <tt class="py-line">        <tt class="py-op">)</tt> </tt>
<a name="L133"></a><tt class="py-lineno">133</tt>  <tt class="py-line"> </tt>
<a name="L134"></a><tt class="py-lineno">134</tt>  <tt class="py-line">    <tt class="py-name">parser</tt> <tt class="py-op">=</tt> <tt id="link-151" class="py-name"><a title="Bio.Restriction.Restriction.RestrictionBatch.format
Bio.expressions.blast.ncbiblast.format
Bio.expressions.blast.wublast.format
Bio.expressions.blocks.format
Bio.expressions.embl.embl65.format
Bio.expressions.fasta.format
Bio.expressions.genbank.format
Bio.expressions.hmmpfam.format
Bio.expressions.swissprot.ipi.format
Bio.expressions.swissprot.speclist.format
Bio.expressions.swissprot.sprot38.format
Bio.expressions.swissprot.sprot40.format
Bio.expressions.transfac.format
Martel.test.test_swissprot38.format
Martel.test.testformats.swissprot38.format" class="py-name" href="#" onclick="return doclink('link-151', 'format', 'link-8');">format</a></tt><tt class="py-op">.</tt><tt id="link-152" class="py-name"><a title="Bio.config.FormatRegistry.FormatObject.make_parser
Bio.config._support.make_cached_expression.make_parser
Martel.Expression.Expression.make_parser
Martel.Expression.HeaderFooter.make_parser
Martel.Expression.ParseRecords.make_parser" class="py-name" href="#" onclick="return doclink('link-152', 'make_parser', 'link-9');">make_parser</a></tt><tt class="py-op">(</tt><tt class="py-op">)</tt> </tt>
<a name="L135"></a><tt class="py-lineno">135</tt>  <tt class="py-line">    <tt class="py-name">grab</tt> <tt class="py-op">=</tt> <tt id="link-153" class="py-name"><a title="Martel.test.test_attrs.GrabElements" class="py-name" href="#" onclick="return doclink('link-153', 'GrabElements', 'link-10');">GrabElements</a></tt><tt class="py-op">(</tt><tt class="py-op">)</tt> </tt>
<a name="L136"></a><tt class="py-lineno">136</tt>  <tt class="py-line">    <tt class="py-name">parser</tt><tt class="py-op">.</tt><tt class="py-name">setContentHandler</tt><tt class="py-op">(</tt><tt class="py-name">grab</tt><tt class="py-op">)</tt> </tt>
<a name="L137"></a><tt class="py-lineno">137</tt>  <tt class="py-line">    <tt class="py-name">parser</tt><tt class="py-op">.</tt><tt id="link-154" class="py-name"><a title="Martel.Parser.HeaderFooterParser.parseString
Martel.Parser.Parser.parseString
Martel.Parser.RecordParser.parseString" class="py-name" href="#" onclick="return doclink('link-154', 'parseString', 'link-11');">parseString</a></tt><tt class="py-op">(</tt><tt class="py-string">"a\nbb\nbb\nccc\n"</tt><tt class="py-op">)</tt> </tt>
<a name="L138"></a><tt class="py-lineno">138</tt>  <tt class="py-line">    <tt id="link-155" class="py-name"><a title="Bio.Restriction.Restriction.RestrictionBatch.elements" class="py-name" href="#" onclick="return doclink('link-155', 'elements', 'link-3');">elements</a></tt> <tt class="py-op">=</tt> <tt class="py-name">grab</tt><tt class="py-op">.</tt><tt id="link-156" class="py-name"><a title="Bio.Restriction.Restriction.RestrictionBatch.elements" class="py-name" href="#" onclick="return doclink('link-156', 'elements', 'link-3');">elements</a></tt> </tt>
<a name="L139"></a><tt class="py-lineno">139</tt>  <tt class="py-line">    <tt class="py-keyword">assert</tt> <tt class="py-name">len</tt><tt class="py-op">(</tt><tt id="link-157" class="py-name"><a title="Bio.Restriction.Restriction.RestrictionBatch.elements" class="py-name" href="#" onclick="return doclink('link-157', 'elements', 'link-3');">elements</a></tt><tt class="py-op">)</tt> <tt class="py-op">==</tt> <tt class="py-number">5</tt><tt class="py-op">,</tt> <tt class="py-name">len</tt><tt class="py-op">(</tt><tt id="link-158" class="py-name"><a title="Bio.Restriction.Restriction.RestrictionBatch.elements" class="py-name" href="#" onclick="return doclink('link-158', 'elements', 'link-3');">elements</a></tt><tt class="py-op">)</tt> </tt>
<a name="L140"></a><tt class="py-lineno">140</tt>  <tt class="py-line">    <tt id="link-159" class="py-name"><a title="Martel.test.test_attrs.check_element" class="py-name" href="#" onclick="return doclink('link-159', 'check_element', 'link-27');">check_element</a></tt><tt class="py-op">(</tt><tt id="link-160" class="py-name"><a title="Bio.Restriction.Restriction.RestrictionBatch.elements" class="py-name" href="#" onclick="return doclink('link-160', 'elements', 'link-3');">elements</a></tt><tt class="py-op">[</tt><tt class="py-number">0</tt><tt class="py-op">]</tt><tt class="py-op">,</tt> <tt class="py-op">(</tt><tt class="py-string">"all"</tt><tt class="py-op">,</tt> <tt class="py-op">{</tt><tt class="py-string">"state"</tt><tt class="py-op">:</tt> <tt class="py-string">"New Mexico"</tt><tt class="py-op">}</tt><tt class="py-op">)</tt><tt class="py-op">)</tt> </tt>
<a name="L141"></a><tt class="py-lineno">141</tt>  <tt class="py-line">    <tt id="link-161" class="py-name"><a title="Martel.test.test_attrs.check_element" class="py-name" href="#" onclick="return doclink('link-161', 'check_element', 'link-27');">check_element</a></tt><tt class="py-op">(</tt><tt id="link-162" class="py-name"><a title="Bio.Restriction.Restriction.RestrictionBatch.elements" class="py-name" href="#" onclick="return doclink('link-162', 'elements', 'link-3');">elements</a></tt><tt class="py-op">[</tt><tt class="py-number">1</tt><tt class="py-op">]</tt><tt class="py-op">,</tt> <tt class="py-op">(</tt><tt class="py-string">"term"</tt><tt class="py-op">,</tt> <tt class="py-op">{</tt><tt class="py-string">"pos"</tt><tt class="py-op">:</tt> <tt class="py-string">"header"</tt><tt class="py-op">}</tt><tt class="py-op">)</tt><tt class="py-op">)</tt> </tt>
<a name="L142"></a><tt class="py-lineno">142</tt>  <tt class="py-line">    <tt id="link-163" class="py-name"><a title="Martel.test.test_attrs.check_element" class="py-name" href="#" onclick="return doclink('link-163', 'check_element', 'link-27');">check_element</a></tt><tt class="py-op">(</tt><tt id="link-164" class="py-name"><a title="Bio.Restriction.Restriction.RestrictionBatch.elements" class="py-name" href="#" onclick="return doclink('link-164', 'elements', 'link-3');">elements</a></tt><tt class="py-op">[</tt><tt class="py-number">2</tt><tt class="py-op">]</tt><tt class="py-op">,</tt> <tt class="py-op">(</tt><tt class="py-string">"term"</tt><tt class="py-op">,</tt> <tt class="py-op">{</tt><tt class="py-string">"pos"</tt><tt class="py-op">:</tt> <tt class="py-string">"body"</tt><tt class="py-op">}</tt><tt class="py-op">)</tt><tt class="py-op">)</tt> </tt>
<a name="L143"></a><tt class="py-lineno">143</tt>  <tt class="py-line">    <tt id="link-165" class="py-name"><a title="Martel.test.test_attrs.check_element" class="py-name" href="#" onclick="return doclink('link-165', 'check_element', 'link-27');">check_element</a></tt><tt class="py-op">(</tt><tt id="link-166" class="py-name"><a title="Bio.Restriction.Restriction.RestrictionBatch.elements" class="py-name" href="#" onclick="return doclink('link-166', 'elements', 'link-3');">elements</a></tt><tt class="py-op">[</tt><tt class="py-number">3</tt><tt class="py-op">]</tt><tt class="py-op">,</tt> <tt class="py-op">(</tt><tt class="py-string">"term"</tt><tt class="py-op">,</tt> <tt class="py-op">{</tt><tt class="py-string">"pos"</tt><tt class="py-op">:</tt> <tt class="py-string">"body"</tt><tt class="py-op">}</tt><tt class="py-op">)</tt><tt class="py-op">)</tt> </tt>
<a name="L144"></a><tt class="py-lineno">144</tt>  <tt class="py-line">    <tt id="link-167" class="py-name"><a title="Martel.test.test_attrs.check_element" class="py-name" href="#" onclick="return doclink('link-167', 'check_element', 'link-27');">check_element</a></tt><tt class="py-op">(</tt><tt id="link-168" class="py-name"><a title="Bio.Restriction.Restriction.RestrictionBatch.elements" class="py-name" href="#" onclick="return doclink('link-168', 'elements', 'link-3');">elements</a></tt><tt class="py-op">[</tt><tt class="py-number">4</tt><tt class="py-op">]</tt><tt class="py-op">,</tt> <tt class="py-op">(</tt><tt class="py-string">"term"</tt><tt class="py-op">,</tt> <tt class="py-op">{</tt><tt class="py-string">"pos"</tt><tt class="py-op">:</tt> <tt class="py-string">"footer"</tt><tt class="py-op">}</tt><tt class="py-op">)</tt><tt class="py-op">)</tt> </tt>
</div><a name="L145"></a><tt class="py-lineno">145</tt>  <tt class="py-line">     </tt>
<a name="L146"></a><tt class="py-lineno">146</tt>  <tt class="py-line"> </tt>
<a name="test"></a><div id="test-def"><a name="L147"></a><tt class="py-lineno">147</tt> <a class="py-toggle" href="#" id="test-toggle" onclick="return toggle('test');">-</a><tt class="py-line"><tt class="py-keyword">def</tt> <a class="py-def-name" href="Martel.test.test_attrs-module.html#test">test</a><tt class="py-op">(</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="test-collapsed" style="display:none;" pad="+++" indent="++++"></div><div id="test-expanded"><a name="L148"></a><tt class="py-lineno">148</tt>  <tt class="py-line">    <tt id="link-169" class="py-name" targets="Function Martel.test.test_attrs.test_none()=Martel.test.test_attrs-module.html#test_none"><a title="Martel.test.test_attrs.test_none" class="py-name" href="#" onclick="return doclink('link-169', 'test_none', 'link-169');">test_none</a></tt><tt class="py-op">(</tt><tt class="py-op">)</tt> </tt>
<a name="L149"></a><tt class="py-lineno">149</tt>  <tt class="py-line">    <tt id="link-170" class="py-name" targets="Function Martel.test.test_attrs.test_single()=Martel.test.test_attrs-module.html#test_single"><a title="Martel.test.test_attrs.test_single" class="py-name" href="#" onclick="return doclink('link-170', 'test_single', 'link-170');">test_single</a></tt><tt class="py-op">(</tt><tt class="py-op">)</tt> </tt>
<a name="L150"></a><tt class="py-lineno">150</tt>  <tt class="py-line">    <tt id="link-171" class="py-name" targets="Function Martel.test.test_attrs.test_multi()=Martel.test.test_attrs-module.html#test_multi"><a title="Martel.test.test_attrs.test_multi" class="py-name" href="#" onclick="return doclink('link-171', 'test_multi', 'link-171');">test_multi</a></tt><tt class="py-op">(</tt><tt class="py-op">)</tt> </tt>
<a name="L151"></a><tt class="py-lineno">151</tt>  <tt class="py-line">    <tt id="link-172" class="py-name" targets="Function Martel.test.test_attrs.test_escape()=Martel.test.test_attrs-module.html#test_escape"><a title="Martel.test.test_attrs.test_escape" class="py-name" href="#" onclick="return doclink('link-172', 'test_escape', 'link-172');">test_escape</a></tt><tt class="py-op">(</tt><tt class="py-op">)</tt> </tt>
<a name="L152"></a><tt class="py-lineno">152</tt>  <tt class="py-line">    <tt id="link-173" class="py-name" targets="Function Martel.test.test_attrs.test_same_tag()=Martel.test.test_attrs-module.html#test_same_tag"><a title="Martel.test.test_attrs.test_same_tag" class="py-name" href="#" onclick="return doclink('link-173', 'test_same_tag', 'link-173');">test_same_tag</a></tt><tt class="py-op">(</tt><tt class="py-op">)</tt> </tt>
<a name="L153"></a><tt class="py-lineno">153</tt>  <tt class="py-line">    <tt id="link-174" class="py-name" targets="Function Martel.test.test_Parser.test_record_parser()=Martel.test.test_Parser-module.html#test_record_parser,Function Martel.test.test_attrs.test_record_parser()=Martel.test.test_attrs-module.html#test_record_parser"><a title="Martel.test.test_Parser.test_record_parser
Martel.test.test_attrs.test_record_parser" class="py-name" href="#" onclick="return doclink('link-174', 'test_record_parser', 'link-174');">test_record_parser</a></tt><tt class="py-op">(</tt><tt class="py-op">)</tt> </tt>
<a name="L154"></a><tt class="py-lineno">154</tt>  <tt class="py-line">    <tt id="link-175" class="py-name" targets="Function Martel.test.test_attrs.test_header_footer_parser()=Martel.test.test_attrs-module.html#test_header_footer_parser"><a title="Martel.test.test_attrs.test_header_footer_parser" class="py-name" href="#" onclick="return doclink('link-175', 'test_header_footer_parser', 'link-175');">test_header_footer_parser</a></tt><tt class="py-op">(</tt><tt class="py-op">)</tt> </tt>
</div><a name="L155"></a><tt class="py-lineno">155</tt>  <tt class="py-line">     </tt>
<a name="L156"></a><tt class="py-lineno">156</tt>  <tt class="py-line"><tt class="py-keyword">if</tt> <tt class="py-name">__name__</tt> <tt class="py-op">==</tt> <tt class="py-string">"__main__"</tt><tt class="py-op">:</tt> </tt>
<a name="L157"></a><tt class="py-lineno">157</tt>  <tt class="py-line">    <tt id="link-176" class="py-name" targets="Function Bio.Decode.test()=Bio.Decode-module.html#test,Function Bio.EUtils.ReseekFile.test()=Bio.EUtils.ReseekFile-module.html#test,Package Martel.test=Martel.test-module.html,Method Martel.test.support.Storage.test()=Martel.test.support.Storage-class.html#test,Function Martel.test.test()=Martel.test-module.html#test,Function Martel.test.test_Expression.test()=Martel.test.test_Expression-module.html#test,Function Martel.test.test_Generate.test()=Martel.test.test_Generate-module.html#test,Function Martel.test.test_IterParser.test()=Martel.test.test_IterParser-module.html#test,Function Martel.test.test_Iterator.test()=Martel.test.test_Iterator-module.html#test,Function Martel.test.test_LAX.test()=Martel.test.test_LAX-module.html#test,Function Martel.test.test_ParseRecords.test()=Martel.test.test_ParseRecords-module.html#test,Function Martel.test.test_Parser.test()=Martel.test.test_Parser-module.html#test,Function Martel.test.test_RecordReader.test()=Martel.test.test_RecordReader-module.html#test,Function Martel.test.test_RecordReader2.test()=Martel.test.test_RecordReader2-module.html#test,Function Martel.test.test_Time.test()=Martel.test.test_Time-module.html#test,Function Martel.test.test_attrs.test()=Martel.test.test_attrs-module.html#test,Function Martel.test.test_convert_re.test()=Martel.test.test_convert_re-module.html#test,Function Martel.test.test_delimiter.test()=Martel.test.test_delimiter-module.html#test,Function Martel.test.test_macros.test()=Martel.test.test_macros-module.html#test,Function Martel.test.test_optimize.test()=Martel.test.test_optimize-module.html#test,Function Martel.test.test_swissprot38.test()=Martel.test.test_swissprot38-module.html#test"><a title="Bio.Decode.test
Bio.EUtils.ReseekFile.test
Martel.test
Martel.test.support.Storage.test
Martel.test.test
Martel.test.test_Expression.test
Martel.test.test_Generate.test
Martel.test.test_IterParser.test
Martel.test.test_Iterator.test
Martel.test.test_LAX.test
Martel.test.test_ParseRecords.test
Martel.test.test_Parser.test
Martel.test.test_RecordReader.test
Martel.test.test_RecordReader2.test
Martel.test.test_Time.test
Martel.test.test_attrs.test
Martel.test.test_convert_re.test
Martel.test.test_delimiter.test
Martel.test.test_macros.test
Martel.test.test_optimize.test
Martel.test.test_swissprot38.test" class="py-name" href="#" onclick="return doclink('link-176', 'test', 'link-176');">test</a></tt><tt class="py-op">(</tt><tt class="py-op">)</tt> </tt>
<a name="L158"></a><tt class="py-lineno">158</tt>  <tt class="py-line"> </tt><script type="text/javascript">
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