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<a href="Bio-module.html">Package Bio</a> ::
<a href="Bio.dbdefs-module.html">Package dbdefs</a> ::
Module pdb
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<!-- ==================== MODULE DESCRIPTION ==================== -->
<h1 class="epydoc">Module pdb</h1><p class="nomargin-top"><span class="codelink"><a href="Bio.dbdefs.pdb-pysrc.html">source code</a></span></p>
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<a name="not_header_expr"></a><span class="summary-name">not_header_expr</span> = <code title="AssertNot(Str("HEADER"))">AssertNot(Str("HEADER"))</code>
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<a href="Bio.dbdefs.pdb-module.html#pdb_rcsb_cgi" class="summary-name">pdb_rcsb_cgi</a> = <code title="CGIDB(name= "pdb-rcsb-cgi", cgi= "http://www.rcsb.org/pdb/cgi/export.c\
gi", url= "XXX PLEASE FILL THIS IN XXX", delay= 5.0, params= [("format\
", "PDB"), ("compression", "None")], key= "pdbId", failure_cases= [(no\
t_header_expr, "results do not look like PDB format")])">CGIDB(name= "pdb-rcsb-cgi", cgi= "http://www.rc<code class="variable-ellipsis">...</code></code>
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<a href="Bio.dbdefs.pdb-module.html#pdb_ebi_cgi" class="summary-name">pdb_ebi_cgi</a> = <code title="CGIDB(name= "pdb-ebi-cgi", cgi= "http://www.ebi.ac.uk/cgi-bin/dbfetch"\
, url= "http://www.ebi.ac.uk/cgi-bin/dbfetch", delay= 5.0, params= [("\
db", "PDB"), ("format", "default"), ("style", "raw"),], key= "id", fai\
lure_cases= [(not_header_expr, "results do not look like PDB format")]\
)">CGIDB(name= "pdb-ebi-cgi", cgi= "http://www.ebi.<code class="variable-ellipsis">...</code></code>
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<span class="summary-type"> </span>
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<a name="pdb"></a><span class="summary-name">pdb</span> = <code title="DBGroup(name= "pdb", behavior= "serial")">DBGroup(name= "pdb", behavior= "serial")</code>
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<h3 class="epydoc">pdb_rcsb_cgi</h3>
<dl class="fields">
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<dt>Value:</dt>
<dd><table><tr><td><pre class="variable">
CGIDB(name= "pdb-rcsb-cgi", cgi= "http://www.rcsb.org/pdb/cgi/export.c<span class="variable-linewrap"><img src="crarr.png" alt="\" /></span>
gi", url= "XXX PLEASE FILL THIS IN XXX", delay= 5.0, params= [("format<span class="variable-linewrap"><img src="crarr.png" alt="\" /></span>
", "PDB"), ("compression", "None")], key= "pdbId", failure_cases= [(no<span class="variable-linewrap"><img src="crarr.png" alt="\" /></span>
t_header_expr, "results do not look like PDB format")])
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<h3 class="epydoc">pdb_ebi_cgi</h3>
<dl class="fields">
</dl>
<dl class="fields">
<dt>Value:</dt>
<dd><table><tr><td><pre class="variable">
CGIDB(name= "pdb-ebi-cgi", cgi= "http://www.ebi.ac.uk/cgi-bin/dbfetch"<span class="variable-linewrap"><img src="crarr.png" alt="\" /></span>
, url= "http://www.ebi.ac.uk/cgi-bin/dbfetch", delay= 5.0, params= [("<span class="variable-linewrap"><img src="crarr.png" alt="\" /></span>
db", "PDB"), ("format", "default"), ("style", "raw"),], key= "id", fai<span class="variable-linewrap"><img src="crarr.png" alt="\" /></span>
lure_cases= [(not_header_expr, "results do not look like PDB format")]<span class="variable-linewrap"><img src="crarr.png" alt="\" /></span>
)
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