Sophie

Sophie

distrib > Mandriva > 2008.1 > x86_64 > by-pkgid > 763d6289e1351f2d34257ce697a3ccb7 > files > 1286

biopython-doc-1.47-2mdv2008.1.x86_64.rpm

<?xml version="1.0" encoding="ascii"?>
<!DOCTYPE html PUBLIC "-//W3C//DTD XHTML 1.0 Transitional//EN"
          "DTD/xhtml1-transitional.dtd">
<html xmlns="http://www.w3.org/1999/xhtml" xml:lang="en" lang="en">
<head>
  <title>Bio.Restriction.Restriction.RestrictionType</title>
  <link rel="stylesheet" href="epydoc.css" type="text/css" />
  <script type="text/javascript" src="epydoc.js"></script>
</head>

<body bgcolor="white" text="black" link="blue" vlink="#204080"
      alink="#204080">
<!-- ==================== NAVIGATION BAR ==================== -->
<table class="navbar" border="0" width="100%" cellpadding="0"
       bgcolor="#a0c0ff" cellspacing="0">
  <tr valign="middle">

  <!-- Tree link -->
      <th>&nbsp;&nbsp;&nbsp;<a
        href="module-tree.html">Trees</a>&nbsp;&nbsp;&nbsp;</th>

  <!-- Index link -->
      <th>&nbsp;&nbsp;&nbsp;<a
        href="identifier-index.html">Indices</a>&nbsp;&nbsp;&nbsp;</th>

  <!-- Help link -->
      <th>&nbsp;&nbsp;&nbsp;<a
        href="help.html">Help</a>&nbsp;&nbsp;&nbsp;</th>

      <th class="navbar" width="100%"></th>
  </tr>
</table>
<table width="100%" cellpadding="0" cellspacing="0">
  <tr valign="top">
    <td width="100%">
      <span class="breadcrumbs">
        <a href="Bio-module.html">Package&nbsp;Bio</a> ::
        <a href="Bio.Restriction-module.html">Package&nbsp;Restriction</a> ::
        <a href="Bio.Restriction.Restriction-module.html">Module&nbsp;Restriction</a> ::
        Class&nbsp;RestrictionType
      </span>
    </td>
    <td>
      <table cellpadding="0" cellspacing="0">
        <!-- hide/show private -->
        <tr><td align="right"><span class="options">[<a href="javascript:void(0);" class="privatelink"
    onclick="toggle_private();">hide&nbsp;private</a>]</span></td></tr>
        <tr><td align="right"><span class="options"
            >[<a href="frames.html" target="_top">frames</a
            >]&nbsp;|&nbsp;<a href="Bio.Restriction.Restriction.RestrictionType-class.html"
            target="_top">no&nbsp;frames</a>]</span></td></tr>
      </table>
    </td>
  </tr>
</table>
<!-- ==================== TYPE DESCRIPTION ==================== -->
<h1 class="epydoc">Type RestrictionType</h1><p class="nomargin-top"><span class="codelink"><a href="Bio.Restriction.Restriction-pysrc.html#RestrictionType">source&nbsp;code</a></span></p>
<pre class="base-tree">
object --+    
         |    
      type --+
             |
            <strong class="uidshort">RestrictionType</strong>
</pre>

<hr />
<p>RestrictionType. Type from which derives all enzyme classes.</p>
  <p>Implement the operator methods.</p>

<!-- ==================== INSTANCE METHODS ==================== -->
<a name="section-InstanceMethods"></a>
<table class="summary" border="1" cellpadding="3"
       cellspacing="0" width="100%" bgcolor="white">
<tr bgcolor="#70b0f0" class="table-header">
  <td colspan="2" class="table-header">
    <table border="0" cellpadding="0" cellspacing="0" width="100%">
      <tr valign="top">
        <td align="left"><span class="table-header">Instance Methods</span></td>
        <td align="right" valign="top"
         ><span class="options">[<a href="#section-InstanceMethods"
         class="privatelink" onclick="toggle_private();"
         >hide private</a>]</span></td>
      </tr>
    </table>
  </td>
</tr>
<tr>
    <td width="15%" align="right" valign="top" class="summary">
      <span class="summary-type">RestrictionType instance</span>
    </td><td class="summary">
      <table width="100%" cellpadding="0" cellspacing="0" border="0">
        <tr>
          <td><span class="summary-sig"><a href="Bio.Restriction.Restriction.RestrictionType-class.html#__init__" class="summary-sig-name">__init__</a>(<span class="summary-sig-arg">name</span>,
        <span class="summary-sig-arg">bases</span>=<span class="summary-sig-default">''</span>,
        <span class="summary-sig-arg">dct</span>=<span class="summary-sig-default">()</span>)</span><br />
      Not intended to be used in normal operation.</td>
          <td align="right" valign="top">
            <span class="codelink"><a href="Bio.Restriction.Restriction-pysrc.html#RestrictionType.__init__">source&nbsp;code</a></span>
            
          </td>
        </tr>
      </table>
      
    </td>
  </tr>
<tr>
    <td width="15%" align="right" valign="top" class="summary">
      <span class="summary-type">RestrictionBatch()</span>
    </td><td class="summary">
      <table width="100%" cellpadding="0" cellspacing="0" border="0">
        <tr>
          <td><span class="summary-sig"><a href="Bio.Restriction.Restriction.RestrictionType-class.html#__add__" class="summary-sig-name">__add__</a>(<span class="summary-sig-arg">RE</span>,
        <span class="summary-sig-arg">other</span>)</span><br />
      if other is an enzyme returns a batch of the two enzymes.</td>
          <td align="right" valign="top">
            <span class="codelink"><a href="Bio.Restriction.Restriction-pysrc.html#RestrictionType.__add__">source&nbsp;code</a></span>
            
          </td>
        </tr>
      </table>
      
    </td>
  </tr>
<tr>
    <td width="15%" align="right" valign="top" class="summary">
      <span class="summary-type">list</span>
    </td><td class="summary">
      <table width="100%" cellpadding="0" cellspacing="0" border="0">
        <tr>
          <td><span class="summary-sig"><a name="__div__"></a><span class="summary-sig-name">__div__</span>(<span class="summary-sig-arg">RE</span>,
        <span class="summary-sig-arg">other</span>)</span><br />
      RE/other returns RE.search(other).</td>
          <td align="right" valign="top">
            <span class="codelink"><a href="Bio.Restriction.Restriction-pysrc.html#RestrictionType.__div__">source&nbsp;code</a></span>
            
          </td>
        </tr>
      </table>
      
    </td>
  </tr>
<tr>
    <td width="15%" align="right" valign="top" class="summary">
      <span class="summary-type">list</span>
    </td><td class="summary">
      <table width="100%" cellpadding="0" cellspacing="0" border="0">
        <tr>
          <td><span class="summary-sig"><a name="__rdiv__"></a><span class="summary-sig-name">__rdiv__</span>(<span class="summary-sig-arg">RE</span>,
        <span class="summary-sig-arg">other</span>)</span><br />
      other/RE returns RE.search(other).</td>
          <td align="right" valign="top">
            <span class="codelink"><a href="Bio.Restriction.Restriction-pysrc.html#RestrictionType.__rdiv__">source&nbsp;code</a></span>
            
          </td>
        </tr>
      </table>
      
    </td>
  </tr>
<tr>
    <td width="15%" align="right" valign="top" class="summary">
      <span class="summary-type">list</span>
    </td><td class="summary">
      <table width="100%" cellpadding="0" cellspacing="0" border="0">
        <tr>
          <td><span class="summary-sig"><a name="__truediv__"></a><span class="summary-sig-name">__truediv__</span>(<span class="summary-sig-arg">RE</span>,
        <span class="summary-sig-arg">other</span>)</span><br />
      RE/other returns RE.search(other).</td>
          <td align="right" valign="top">
            <span class="codelink"><a href="Bio.Restriction.Restriction-pysrc.html#RestrictionType.__truediv__">source&nbsp;code</a></span>
            
          </td>
        </tr>
      </table>
      
    </td>
  </tr>
<tr>
    <td width="15%" align="right" valign="top" class="summary">
      <span class="summary-type">list</span>
    </td><td class="summary">
      <table width="100%" cellpadding="0" cellspacing="0" border="0">
        <tr>
          <td><span class="summary-sig"><a name="__rtruediv__"></a><span class="summary-sig-name">__rtruediv__</span>(<span class="summary-sig-arg">RE</span>,
        <span class="summary-sig-arg">other</span>)</span><br />
      other/RE returns RE.search(other).</td>
          <td align="right" valign="top">
            <span class="codelink"><a href="Bio.Restriction.Restriction-pysrc.html#RestrictionType.__rtruediv__">source&nbsp;code</a></span>
            
          </td>
        </tr>
      </table>
      
    </td>
  </tr>
<tr>
    <td width="15%" align="right" valign="top" class="summary">
      <span class="summary-type">list</span>
    </td><td class="summary">
      <table width="100%" cellpadding="0" cellspacing="0" border="0">
        <tr>
          <td><span class="summary-sig"><a name="__floordiv__"></a><span class="summary-sig-name">__floordiv__</span>(<span class="summary-sig-arg">RE</span>,
        <span class="summary-sig-arg">other</span>)</span><br />
      RE//other returns RE.catalyse(other).</td>
          <td align="right" valign="top">
            <span class="codelink"><a href="Bio.Restriction.Restriction-pysrc.html#RestrictionType.__floordiv__">source&nbsp;code</a></span>
            
          </td>
        </tr>
      </table>
      
    </td>
  </tr>
<tr>
    <td width="15%" align="right" valign="top" class="summary">
      <span class="summary-type">list</span>
    </td><td class="summary">
      <table width="100%" cellpadding="0" cellspacing="0" border="0">
        <tr>
          <td><span class="summary-sig"><a name="__rfloordiv__"></a><span class="summary-sig-name">__rfloordiv__</span>(<span class="summary-sig-arg">RE</span>,
        <span class="summary-sig-arg">other</span>)</span><br />
      other//RE returns RE.catalyse(other).</td>
          <td align="right" valign="top">
            <span class="codelink"><a href="Bio.Restriction.Restriction-pysrc.html#RestrictionType.__rfloordiv__">source&nbsp;code</a></span>
            
          </td>
        </tr>
      </table>
      
    </td>
  </tr>
<tr>
    <td width="15%" align="right" valign="top" class="summary">
      <span class="summary-type">str</span>
    </td><td class="summary">
      <table width="100%" cellpadding="0" cellspacing="0" border="0">
        <tr>
          <td><span class="summary-sig"><a href="Bio.Restriction.Restriction.RestrictionType-class.html#__str__" class="summary-sig-name">__str__</a>(<span class="summary-sig-arg">RE</span>)</span><br />
      return the name of the enzyme.</td>
          <td align="right" valign="top">
            <span class="codelink"><a href="Bio.Restriction.Restriction-pysrc.html#RestrictionType.__str__">source&nbsp;code</a></span>
            
          </td>
        </tr>
      </table>
      
    </td>
  </tr>
<tr>
    <td width="15%" align="right" valign="top" class="summary">
      <span class="summary-type">str</span>
    </td><td class="summary">
      <table width="100%" cellpadding="0" cellspacing="0" border="0">
        <tr>
          <td><span class="summary-sig"><a href="Bio.Restriction.Restriction.RestrictionType-class.html#__repr__" class="summary-sig-name">__repr__</a>(<span class="summary-sig-arg">RE</span>)</span><br />
      used with eval or exec will instantiate the enzyme.</td>
          <td align="right" valign="top">
            <span class="codelink"><a href="Bio.Restriction.Restriction-pysrc.html#RestrictionType.__repr__">source&nbsp;code</a></span>
            
          </td>
        </tr>
      </table>
      
    </td>
  </tr>
<tr>
    <td width="15%" align="right" valign="top" class="summary">
      <span class="summary-type">int</span>
    </td><td class="summary">
      <table width="100%" cellpadding="0" cellspacing="0" border="0">
        <tr>
          <td><span class="summary-sig"><a name="__len__"></a><span class="summary-sig-name">__len__</span>(<span class="summary-sig-arg">RE</span>)</span><br />
      length of the recognition site.</td>
          <td align="right" valign="top">
            <span class="codelink"><a href="Bio.Restriction.Restriction-pysrc.html#RestrictionType.__len__">source&nbsp;code</a></span>
            
          </td>
        </tr>
      </table>
      
    </td>
  </tr>
<tr>
    <td width="15%" align="right" valign="top" class="summary">
      <span class="summary-type">&nbsp;</span>
    </td><td class="summary">
      <table width="100%" cellpadding="0" cellspacing="0" border="0">
        <tr>
          <td><span class="summary-sig"><a href="Bio.Restriction.Restriction.RestrictionType-class.html#__eq__" class="summary-sig-name">__eq__</a>(<span class="summary-sig-arg">cls</span>,
        <span class="summary-sig-arg">other</span>)</span><br />
      RE == other -&gt; bool</td>
          <td align="right" valign="top">
            <span class="codelink"><a href="Bio.Restriction.Restriction-pysrc.html#RestrictionType.__eq__">source&nbsp;code</a></span>
            
          </td>
        </tr>
      </table>
      
    </td>
  </tr>
<tr>
    <td width="15%" align="right" valign="top" class="summary">
      <span class="summary-type">&nbsp;</span>
    </td><td class="summary">
      <table width="100%" cellpadding="0" cellspacing="0" border="0">
        <tr>
          <td><span class="summary-sig"><a href="Bio.Restriction.Restriction.RestrictionType-class.html#__ne__" class="summary-sig-name">__ne__</a>(<span class="summary-sig-arg">cls</span>,
        <span class="summary-sig-arg">other</span>)</span><br />
      RE != other -&gt; bool.</td>
          <td align="right" valign="top">
            <span class="codelink"><a href="Bio.Restriction.Restriction-pysrc.html#RestrictionType.__ne__">source&nbsp;code</a></span>
            
          </td>
        </tr>
      </table>
      
    </td>
  </tr>
<tr>
    <td width="15%" align="right" valign="top" class="summary">
      <span class="summary-type">&nbsp;</span>
    </td><td class="summary">
      <table width="100%" cellpadding="0" cellspacing="0" border="0">
        <tr>
          <td><span class="summary-sig"><a href="Bio.Restriction.Restriction.RestrictionType-class.html#__rshift__" class="summary-sig-name">__rshift__</a>(<span class="summary-sig-arg">cls</span>,
        <span class="summary-sig-arg">other</span>)</span><br />
      RE &gt;&gt; other -&gt; bool.</td>
          <td align="right" valign="top">
            <span class="codelink"><a href="Bio.Restriction.Restriction-pysrc.html#RestrictionType.__rshift__">source&nbsp;code</a></span>
            
          </td>
        </tr>
      </table>
      
    </td>
  </tr>
<tr>
    <td width="15%" align="right" valign="top" class="summary">
      <span class="summary-type">&nbsp;</span>
    </td><td class="summary">
      <table width="100%" cellpadding="0" cellspacing="0" border="0">
        <tr>
          <td><span class="summary-sig"><a href="Bio.Restriction.Restriction.RestrictionType-class.html#__mod__" class="summary-sig-name">__mod__</a>(<span class="summary-sig-arg">cls</span>,
        <span class="summary-sig-arg">other</span>)</span><br />
      a % b -&gt; bool.</td>
          <td align="right" valign="top">
            <span class="codelink"><a href="Bio.Restriction.Restriction-pysrc.html#RestrictionType.__mod__">source&nbsp;code</a></span>
            
          </td>
        </tr>
      </table>
      
    </td>
  </tr>
<tr>
    <td width="15%" align="right" valign="top" class="summary">
      <span class="summary-type">&nbsp;</span>
    </td><td class="summary">
      <table width="100%" cellpadding="0" cellspacing="0" border="0">
        <tr>
          <td><span class="summary-sig"><a href="Bio.Restriction.Restriction.RestrictionType-class.html#__ge__" class="summary-sig-name">__ge__</a>(<span class="summary-sig-arg">cls</span>,
        <span class="summary-sig-arg">other</span>)</span><br />
      a &gt;= b -&gt; bool.</td>
          <td align="right" valign="top">
            <span class="codelink"><a href="Bio.Restriction.Restriction-pysrc.html#RestrictionType.__ge__">source&nbsp;code</a></span>
            
          </td>
        </tr>
      </table>
      
    </td>
  </tr>
<tr>
    <td width="15%" align="right" valign="top" class="summary">
      <span class="summary-type">&nbsp;</span>
    </td><td class="summary">
      <table width="100%" cellpadding="0" cellspacing="0" border="0">
        <tr>
          <td><span class="summary-sig"><a href="Bio.Restriction.Restriction.RestrictionType-class.html#__gt__" class="summary-sig-name">__gt__</a>(<span class="summary-sig-arg">cls</span>,
        <span class="summary-sig-arg">other</span>)</span><br />
      a &gt; b -&gt; bool.</td>
          <td align="right" valign="top">
            <span class="codelink"><a href="Bio.Restriction.Restriction-pysrc.html#RestrictionType.__gt__">source&nbsp;code</a></span>
            
          </td>
        </tr>
      </table>
      
    </td>
  </tr>
<tr>
    <td width="15%" align="right" valign="top" class="summary">
      <span class="summary-type">&nbsp;</span>
    </td><td class="summary">
      <table width="100%" cellpadding="0" cellspacing="0" border="0">
        <tr>
          <td><span class="summary-sig"><a href="Bio.Restriction.Restriction.RestrictionType-class.html#__le__" class="summary-sig-name">__le__</a>(<span class="summary-sig-arg">cls</span>,
        <span class="summary-sig-arg">other</span>)</span><br />
      a &lt;= b -&gt; bool.</td>
          <td align="right" valign="top">
            <span class="codelink"><a href="Bio.Restriction.Restriction-pysrc.html#RestrictionType.__le__">source&nbsp;code</a></span>
            
          </td>
        </tr>
      </table>
      
    </td>
  </tr>
<tr>
    <td width="15%" align="right" valign="top" class="summary">
      <span class="summary-type">&nbsp;</span>
    </td><td class="summary">
      <table width="100%" cellpadding="0" cellspacing="0" border="0">
        <tr>
          <td><span class="summary-sig"><a href="Bio.Restriction.Restriction.RestrictionType-class.html#__lt__" class="summary-sig-name">__lt__</a>(<span class="summary-sig-arg">cls</span>,
        <span class="summary-sig-arg">other</span>)</span><br />
      a &lt; b -&gt; bool.</td>
          <td align="right" valign="top">
            <span class="codelink"><a href="Bio.Restriction.Restriction-pysrc.html#RestrictionType.__lt__">source&nbsp;code</a></span>
            
          </td>
        </tr>
      </table>
      
    </td>
  </tr>
  <tr>
    <td colspan="2" class="summary">
    <p class="indent-wrapped-lines"><b>Inherited from <code>type</code></b>:
      <code>__call__</code>,
      <code>__cmp__</code>,
      <code>__delattr__</code>,
      <code>__getattribute__</code>,
      <code>__hash__</code>,
      <code>__new__</code>,
      <code>__setattr__</code>,
      <code>__subclasses__</code>,
      <code>mro</code>
      </p>
    <p class="indent-wrapped-lines"><b>Inherited from <code>object</code></b>:
      <code>__reduce__</code>,
      <code>__reduce_ex__</code>
      </p>
    </td>
  </tr>
</table>
<!-- ==================== PROPERTIES ==================== -->
<a name="section-Properties"></a>
<table class="summary" border="1" cellpadding="3"
       cellspacing="0" width="100%" bgcolor="white">
<tr bgcolor="#70b0f0" class="table-header">
  <td colspan="2" class="table-header">
    <table border="0" cellpadding="0" cellspacing="0" width="100%">
      <tr valign="top">
        <td align="left"><span class="table-header">Properties</span></td>
        <td align="right" valign="top"
         ><span class="options">[<a href="#section-Properties"
         class="privatelink" onclick="toggle_private();"
         >hide private</a>]</span></td>
      </tr>
    </table>
  </td>
</tr>
  <tr>
    <td colspan="2" class="summary">
    <p class="indent-wrapped-lines"><b>Inherited from <code>type</code></b>:
      <code>__base__</code>,
      <code>__bases__</code>,
      <code>__basicsize__</code>,
      <code>__dictoffset__</code>,
      <code>__flags__</code>,
      <code>__itemsize__</code>,
      <code>__mro__</code>,
      <code>__name__</code>,
      <code>__weakrefoffset__</code>
      </p>
    <p class="indent-wrapped-lines"><b>Inherited from <code>object</code></b>:
      <code>__class__</code>
      </p>
    </td>
  </tr>
</table>
<!-- ==================== METHOD DETAILS ==================== -->
<a name="section-MethodDetails"></a>
<table class="details" border="1" cellpadding="3"
       cellspacing="0" width="100%" bgcolor="white">
<tr bgcolor="#70b0f0" class="table-header">
  <td colspan="2" class="table-header">
    <table border="0" cellpadding="0" cellspacing="0" width="100%">
      <tr valign="top">
        <td align="left"><span class="table-header">Method Details</span></td>
        <td align="right" valign="top"
         ><span class="options">[<a href="#section-MethodDetails"
         class="privatelink" onclick="toggle_private();"
         >hide private</a>]</span></td>
      </tr>
    </table>
  </td>
</tr>
</table>
<a name="__init__"></a>
<div>
<table class="details" border="1" cellpadding="3"
       cellspacing="0" width="100%" bgcolor="white">
<tr><td>
  <table width="100%" cellpadding="0" cellspacing="0" border="0">
  <tr valign="top"><td>
  <h3 class="epydoc"><span class="sig"><span class="sig-name">__init__</span>(<span class="sig-arg">name</span>,
        <span class="sig-arg">bases</span>=<span class="sig-default">''</span>,
        <span class="sig-arg">dct</span>=<span class="sig-default">()</span>)</span>
    <br /><em class="fname">(Constructor)</em>
  </h3>
  </td><td align="right" valign="top"
    ><span class="codelink"><a href="Bio.Restriction.Restriction-pysrc.html#RestrictionType.__init__">source&nbsp;code</a></span>&nbsp;
    </td>
  </tr></table>
  
  <p>Not intended to be used in normal operation. The enzymes are 
  instantiated when importing the module.</p>
  <p>see below.</p>
  <dl class="fields">
    <dt>Returns: RestrictionType instance</dt>
    <dt>Overrides:
        object.__init__
    </dt>
  </dl>
</td></tr></table>
</div>
<a name="__add__"></a>
<div>
<table class="details" border="1" cellpadding="3"
       cellspacing="0" width="100%" bgcolor="white">
<tr><td>
  <table width="100%" cellpadding="0" cellspacing="0" border="0">
  <tr valign="top"><td>
  <h3 class="epydoc"><span class="sig"><span class="sig-name">__add__</span>(<span class="sig-arg">RE</span>,
        <span class="sig-arg">other</span>)</span>
    <br /><em class="fname">(Addition operator)</em>
  </h3>
  </td><td align="right" valign="top"
    ><span class="codelink"><a href="Bio.Restriction.Restriction-pysrc.html#RestrictionType.__add__">source&nbsp;code</a></span>&nbsp;
    </td>
  </tr></table>
  
  <p>if other is an enzyme returns a batch of the two enzymes. if other is 
  already a RestrictionBatch add enzyme to it.</p>
  <dl class="fields">
    <dt>Returns: RestrictionBatch()</dt>
  </dl>
</td></tr></table>
</div>
<a name="__str__"></a>
<div>
<table class="details" border="1" cellpadding="3"
       cellspacing="0" width="100%" bgcolor="white">
<tr><td>
  <table width="100%" cellpadding="0" cellspacing="0" border="0">
  <tr valign="top"><td>
  <h3 class="epydoc"><span class="sig"><span class="sig-name">__str__</span>(<span class="sig-arg">RE</span>)</span>
    <br /><em class="fname">(Informal representation operator)</em>
  </h3>
  </td><td align="right" valign="top"
    ><span class="codelink"><a href="Bio.Restriction.Restriction-pysrc.html#RestrictionType.__str__">source&nbsp;code</a></span>&nbsp;
    </td>
  </tr></table>
  
  <p>return the name of the enzyme.</p>
  <dl class="fields">
    <dt>Returns: str</dt>
    <dt>Overrides:
        object.__str__
    </dt>
  </dl>
</td></tr></table>
</div>
<a name="__repr__"></a>
<div>
<table class="details" border="1" cellpadding="3"
       cellspacing="0" width="100%" bgcolor="white">
<tr><td>
  <table width="100%" cellpadding="0" cellspacing="0" border="0">
  <tr valign="top"><td>
  <h3 class="epydoc"><span class="sig"><span class="sig-name">__repr__</span>(<span class="sig-arg">RE</span>)</span>
    <br /><em class="fname">(Representation operator)</em>
  </h3>
  </td><td align="right" valign="top"
    ><span class="codelink"><a href="Bio.Restriction.Restriction-pysrc.html#RestrictionType.__repr__">source&nbsp;code</a></span>&nbsp;
    </td>
  </tr></table>
  
  <p>used with eval or exec will instantiate the enzyme.</p>
  <dl class="fields">
    <dt>Returns: str</dt>
    <dt>Overrides:
        object.__repr__
    </dt>
  </dl>
</td></tr></table>
</div>
<a name="__eq__"></a>
<div>
<table class="details" border="1" cellpadding="3"
       cellspacing="0" width="100%" bgcolor="white">
<tr><td>
  <table width="100%" cellpadding="0" cellspacing="0" border="0">
  <tr valign="top"><td>
  <h3 class="epydoc"><span class="sig"><span class="sig-name">__eq__</span>(<span class="sig-arg">cls</span>,
        <span class="sig-arg">other</span>)</span>
    <br /><em class="fname">(Equality operator)</em>
  </h3>
  </td><td align="right" valign="top"
    ><span class="codelink"><a href="Bio.Restriction.Restriction-pysrc.html#RestrictionType.__eq__">source&nbsp;code</a></span>&nbsp;
    </td>
  </tr></table>
  
  <p>RE == other -&gt; bool</p>
  <p>True if RE and other are the same enzyme.</p>
  <dl class="fields">
  </dl>
</td></tr></table>
</div>
<a name="__ne__"></a>
<div>
<table class="details" border="1" cellpadding="3"
       cellspacing="0" width="100%" bgcolor="white">
<tr><td>
  <table width="100%" cellpadding="0" cellspacing="0" border="0">
  <tr valign="top"><td>
  <h3 class="epydoc"><span class="sig"><span class="sig-name">__ne__</span>(<span class="sig-arg">cls</span>,
        <span class="sig-arg">other</span>)</span>
  </h3>
  </td><td align="right" valign="top"
    ><span class="codelink"><a href="Bio.Restriction.Restriction-pysrc.html#RestrictionType.__ne__">source&nbsp;code</a></span>&nbsp;
    </td>
  </tr></table>
  
  <p>RE != other -&gt; bool. isoschizomer strict, same recognition site, 
  same restriction -&gt; False all the other-&gt; True</p>
  <dl class="fields">
  </dl>
</td></tr></table>
</div>
<a name="__rshift__"></a>
<div>
<table class="details" border="1" cellpadding="3"
       cellspacing="0" width="100%" bgcolor="white">
<tr><td>
  <table width="100%" cellpadding="0" cellspacing="0" border="0">
  <tr valign="top"><td>
  <h3 class="epydoc"><span class="sig"><span class="sig-name">__rshift__</span>(<span class="sig-arg">cls</span>,
        <span class="sig-arg">other</span>)</span>
  </h3>
  </td><td align="right" valign="top"
    ><span class="codelink"><a href="Bio.Restriction.Restriction-pysrc.html#RestrictionType.__rshift__">source&nbsp;code</a></span>&nbsp;
    </td>
  </tr></table>
  
  <p>RE &gt;&gt; other -&gt; bool.</p>
  <p>neoschizomer : same recognition site, different restriction. -&gt; 
  True all the others :                                             -&gt; 
  False</p>
  <dl class="fields">
  </dl>
</td></tr></table>
</div>
<a name="__mod__"></a>
<div>
<table class="details" border="1" cellpadding="3"
       cellspacing="0" width="100%" bgcolor="white">
<tr><td>
  <table width="100%" cellpadding="0" cellspacing="0" border="0">
  <tr valign="top"><td>
  <h3 class="epydoc"><span class="sig"><span class="sig-name">__mod__</span>(<span class="sig-arg">cls</span>,
        <span class="sig-arg">other</span>)</span>
  </h3>
  </td><td align="right" valign="top"
    ><span class="codelink"><a href="Bio.Restriction.Restriction-pysrc.html#RestrictionType.__mod__">source&nbsp;code</a></span>&nbsp;
    </td>
  </tr></table>
  
  <p>a % b -&gt; bool.</p>
  <p>Test compatibility of the overhang of a and b. True if a and b have 
  compatible overhang.</p>
  <dl class="fields">
  </dl>
</td></tr></table>
</div>
<a name="__ge__"></a>
<div>
<table class="details" border="1" cellpadding="3"
       cellspacing="0" width="100%" bgcolor="white">
<tr><td>
  <table width="100%" cellpadding="0" cellspacing="0" border="0">
  <tr valign="top"><td>
  <h3 class="epydoc"><span class="sig"><span class="sig-name">__ge__</span>(<span class="sig-arg">cls</span>,
        <span class="sig-arg">other</span>)</span>
    <br /><em class="fname">(Greater-than-or-equals operator)</em>
  </h3>
  </td><td align="right" valign="top"
    ><span class="codelink"><a href="Bio.Restriction.Restriction-pysrc.html#RestrictionType.__ge__">source&nbsp;code</a></span>&nbsp;
    </td>
  </tr></table>
  
  <p>a &gt;= b -&gt; bool.</p>
  <p>a is greater or equal than b if the a site is longer than b site. if 
  their site have the same length sort by alphabetical order of their 
  names.</p>
  <dl class="fields">
  </dl>
</td></tr></table>
</div>
<a name="__gt__"></a>
<div>
<table class="details" border="1" cellpadding="3"
       cellspacing="0" width="100%" bgcolor="white">
<tr><td>
  <table width="100%" cellpadding="0" cellspacing="0" border="0">
  <tr valign="top"><td>
  <h3 class="epydoc"><span class="sig"><span class="sig-name">__gt__</span>(<span class="sig-arg">cls</span>,
        <span class="sig-arg">other</span>)</span>
    <br /><em class="fname">(Greater-than operator)</em>
  </h3>
  </td><td align="right" valign="top"
    ><span class="codelink"><a href="Bio.Restriction.Restriction-pysrc.html#RestrictionType.__gt__">source&nbsp;code</a></span>&nbsp;
    </td>
  </tr></table>
  
  <p>a &gt; b -&gt; bool.</p>
  <p>sorting order :</p>
  <ol start="1">
    <li>
      size of the recognition site.
    </li>
    <li>
      if equal size, alphabetical order of the names.
    </li>
  </ol>
  <dl class="fields">
  </dl>
</td></tr></table>
</div>
<a name="__le__"></a>
<div>
<table class="details" border="1" cellpadding="3"
       cellspacing="0" width="100%" bgcolor="white">
<tr><td>
  <table width="100%" cellpadding="0" cellspacing="0" border="0">
  <tr valign="top"><td>
  <h3 class="epydoc"><span class="sig"><span class="sig-name">__le__</span>(<span class="sig-arg">cls</span>,
        <span class="sig-arg">other</span>)</span>
    <br /><em class="fname">(Less-than-or-equals operator)</em>
  </h3>
  </td><td align="right" valign="top"
    ><span class="codelink"><a href="Bio.Restriction.Restriction-pysrc.html#RestrictionType.__le__">source&nbsp;code</a></span>&nbsp;
    </td>
  </tr></table>
  
  <p>a &lt;= b -&gt; bool.</p>
  <p>sorting order :</p>
  <ol start="1">
    <li>
      size of the recognition site.
    </li>
    <li>
      if equal size, alphabetical order of the names.
    </li>
  </ol>
  <dl class="fields">
  </dl>
</td></tr></table>
</div>
<a name="__lt__"></a>
<div>
<table class="details" border="1" cellpadding="3"
       cellspacing="0" width="100%" bgcolor="white">
<tr><td>
  <table width="100%" cellpadding="0" cellspacing="0" border="0">
  <tr valign="top"><td>
  <h3 class="epydoc"><span class="sig"><span class="sig-name">__lt__</span>(<span class="sig-arg">cls</span>,
        <span class="sig-arg">other</span>)</span>
    <br /><em class="fname">(Less-than operator)</em>
  </h3>
  </td><td align="right" valign="top"
    ><span class="codelink"><a href="Bio.Restriction.Restriction-pysrc.html#RestrictionType.__lt__">source&nbsp;code</a></span>&nbsp;
    </td>
  </tr></table>
  
  <p>a &lt; b -&gt; bool.</p>
  <p>sorting order :</p>
  <ol start="1">
    <li>
      size of the recognition site.
    </li>
    <li>
      if equal size, alphabetical order of the names.
    </li>
  </ol>
  <dl class="fields">
  </dl>
</td></tr></table>
</div>
<br />
<!-- ==================== NAVIGATION BAR ==================== -->
<table class="navbar" border="0" width="100%" cellpadding="0"
       bgcolor="#a0c0ff" cellspacing="0">
  <tr valign="middle">

  <!-- Tree link -->
      <th>&nbsp;&nbsp;&nbsp;<a
        href="module-tree.html">Trees</a>&nbsp;&nbsp;&nbsp;</th>

  <!-- Index link -->
      <th>&nbsp;&nbsp;&nbsp;<a
        href="identifier-index.html">Indices</a>&nbsp;&nbsp;&nbsp;</th>

  <!-- Help link -->
      <th>&nbsp;&nbsp;&nbsp;<a
        href="help.html">Help</a>&nbsp;&nbsp;&nbsp;</th>

      <th class="navbar" width="100%"></th>
  </tr>
</table>
<table border="0" cellpadding="0" cellspacing="0" width="100%%">
  <tr>
    <td align="left" class="footer">
    Generated by Epydoc 3.0.1 on Mon Sep 15 09:26:38 2008
    </td>
    <td align="right" class="footer">
      <a target="mainFrame" href="http://epydoc.sourceforge.net"
        >http://epydoc.sourceforge.net</a>
    </td>
  </tr>
</table>

<script type="text/javascript">
  <!--
  // Private objects are initially displayed (because if
  // javascript is turned off then we want them to be
  // visible); but by default, we want to hide them.  So hide
  // them unless we have a cookie that says to show them.
  checkCookie();
  // -->
</script>
</body>
</html>