%global packname affy %global Rvers 2.11.0 Name: R-%{packname} Version: 1.26.1 Release: 1%{dist} Summary: Methods for Affymetrix Oligonucleotide Arrays Group: Applications/Engineering License: LGPLv2+ URL: http://bioconductor.org/packages/release/bioc/html/%{packname}.html Source0: http://bioconductor.org/packages/release/bioc/src/contrib/%{packname}_%{version}.tar.gz BuildRoot: %{_tmppath}/%{name}-%{version}-%{release}-root-%(%{__id_u} -n) Requires: R-core >= %{Rvers} R-Biobase R-tkWidgets R-preprocessCore R-affyio BuildRequires: R-devel >= %{Rvers} tex(latex) R-Biobase R-tkWidgets R-preprocessCore-devel R-affyio %description The package contains functions for exploratory oligonucleotide array analysis. The dependancy to tkWidgets only concerns few convenience functions. 'affy' is fully functional without it. %prep %setup -q -c -n %{packname} %build %install rm -rf %{buildroot} # x86/x86_64 -> Architecture dependent package mkdir -p %{buildroot}%{_libdir}/R/library R CMD INSTALL %{packname} -l %{buildroot}%{_libdir}/R/library # Clean up in advance of check test -d %{packname}/src && (cd %{packname}/src; rm -f *.o *.so) rm -rf %{buildroot}%{_libdir}/R/library/R.css %check # Circular dependency with affydata #%{_bindir}/R CMD check %{packname} %clean rm -rf %{buildroot} %files %defattr(-, root, root, -) #i386 arch %dir %{_libdir}/R/library/%{packname} %doc %{_libdir}/R/library/%{packname}/doc %doc %{_libdir}/R/library/%{packname}/html %doc %{_libdir}/R/library/%{packname}/DESCRIPTION %doc %{_libdir}/R/library/%{packname}/NEWS %doc %{_libdir}/R/library/%{packname}/CITATION %{_libdir}/R/library/%{packname}/INDEX %{_libdir}/R/library/%{packname}/NAMESPACE %{_libdir}/R/library/%{packname}/Meta %{_libdir}/R/library/%{packname}/R %{_libdir}/R/library/%{packname}/help %{_libdir}/R/library/%{packname}/data %{_libdir}/R/library/%{packname}/libs %{_libdir}/R/library/%{packname}/demo %{_libdir}/R/library/%{packname}/tests %changelog * Tue May 11 2010 pingou <pingou@pingoured.fr> 1.26.1-1 - Update to version 1.26.1 - Fix url to a more stable form - Remove post/postun R since there is no post/postun * Sat Nov 21 2009 pingou <pingou@pingoured.fr> 1.24.2-1 - Update to 1.24.2 - Remove %%post and %%postun - Adapt %%files to R-2.10.0 * Sun Aug 31 2009 pingou <pingou@pingoured.fr> 1.22.1-3 - Change BR from tetex-latex to tex(latex) to reflect new guidelines change - Correct typo in the description * Wed Aug 19 2009 pingou <pingou@pingoured.fr> 1.22.1-2 - Add R-preprocessCore-devel as BR (oops) * Wed Aug 19 2009 pingou <pingou@pingoured.fr> 1.22.1-1 - Update to 1.22.1 which correct license issue * Sat Aug 01 2009 pingou <pingou@pingoured.fr> 1.22.0-1 - initial package for Fedora